AutismKB 2.0

Annotation Detail for MAP7D3


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Basic Information Top
Gene Symbol:MAP7D3 ( FLJ12401,FLJ12649 )
Gene Full Name: MAP7 domain containing 3
Band: Xq26.3
Quick LinksEntrez ID:79649; OMIM: NA; Uniprot ID:MA7D3_HUMAN; ENSEMBL ID: ENSG00000129680; HGNC ID: 25742
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst3 / 6231948
fetus21 / 56401237
neonate0 / 310970 
infant1 / 2362042
juvenile2 / 5555635
adult42 / 193912121
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor4 / 9417842
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor1 / 1729057
gastrointestinal tumor4 / 11936933
germ cell tumor9 / 26384534
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia4 / 9584241
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia6 / 9725061
normal95 / 336030728
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer2 / 10268019
retinoblastoma1 / 4635621
skin tumor5 / 12494940
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder0 / 297570 
blood2 / 12347816
bone1 / 7165513
bone marrow1 / 4880120
brain10 / 11009899
cervix0 / 481710 
connective tissue6 / 14925540
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus1 / 2020949
eye2 / 2110549
heart5 / 8962655
intestine4 / 23447217
kidney12 / 21177756
larynx0 / 241450 
liver7 / 20774333
lung3 / 3369748
lymph0 / 442700 
lymph node5 / 9161054
mammary gland7 / 15327145
mouth0 / 670520 
muscle4 / 10771537
nerve0 / 157680 
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland2 / 16585120
placenta8 / 28082528
prostate7 / 18934536
salivary gland0 / 201550 
skin7 / 21057433
spleen0 / 539520 
stomach4 / 9661941
testis16 / 33044248
thymus1 / 8113112
thyroid3 / 4747363
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus6 / 23287825
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219576_at
Cell line Expression level Expression bar
721_B_lymphoblasts11
Adipocyte9.45
AdrenalCortex15.2
Adrenalgland8.35
Amygdala9.7
Appendix11.45
AtrioventricularNode9.85
BDCA4+_DentriticCells8.7
Bonemarrow9.95
BronchialEpithelialCells8
CD105+_Endothelial9
CD14+_Monocytes9.55
CD19+_BCells(neg._sel.)9.4
CD33+_Myeloid11.1
CD34+10.65
CD4+_Tcells9.3
CD56+_NKCells9.6
CD71+_EarlyErythroid8.85
CD8+_Tcells7.5
CardiacMyocytes14.75
Caudatenucleus8.65
Cerebellum7.95
CerebellumPeduncles11.55
CiliaryGanglion11.05
CingulateCortex10.1
Colorectaladenocarcinoma8.75
DorsalRootGanglion9.2
FetalThyroid10.15
Fetalbrain9.2
Fetalliver8.6
Fetallung7.95
GlobusPallidus7.6
Heart13.15
Hypothalamus9.45
Kidney8.3
Leukemia_chronicMyelogenousK-5628.25
Leukemia_promyelocytic-HL-608.55
Leukemialymphoblastic(MOLT-4)8.1
Liver13.65
Lung9.35
Lymphnode8.3
Lymphoma_burkitts(Daudi)12.65
Lymphoma_burkitts(Raji)14.05
MedullaOblongata9.15
OccipitalLobe8.6
OlfactoryBulb7.7
Ovary7.1
Pancreas8.15
PancreaticIslet10.4
ParietalLobe11.2
Pituitary11.45
Placenta8.8
Pons9.35
PrefrontalCortex12.05
Prostate9.6
Salivarygland7.85
SkeletalMuscle12.8
Skin9.55
SmoothMuscle11.15
Spinalcord10.35
SubthalamicNucleus10.5
SuperiorCervicalGanglion18.45
TemporalLobe9.15
Testis8.4
TestisGermCell9.55
TestisIntersitial8.65
TestisLeydigCell10.9
TestisSeminiferousTubule9.5
Thalamus9.95
Thymus6.9
Thyroid9.85
Tongue11.2
Tonsil9.85
Trachea8.2
TrigeminalGanglion11.45
Uterus8.05
UterusCorpus10
WholeBlood10.35
Wholebrain6.95
colon9.65
pineal_day11.34
pineal_night10.94
retina12.025
small_intestine9.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P22557
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.93 ± 0.8
Basal Forebrain5.13 ± 0.37
Basal Part of Pons4.66 ± 0.48
Cerebellar Cortex4.36 ± 0.4
Cerebellar Nuclei5.13 ± 0.4
Claustrum4.53 ± 0.75
Epithalamus5.93 ± 0.43
Frontal Lobe4.68 ± 0.58
Globus Pallidus5.98 ± 0.39
Hypothalamus5.08 ± 0.46
Insula4.72 ± 0.35
Limbic Lobe4.57 ± 0.58
Mesencephalon5.03 ± 0.46
Myelencephalon4.85 ± 0.49
Occipital Lobe4.9 ± 0.35
Parietal Lobe4.69 ± 0.55
Pontine Tegmentum4.71 ± 0.54
Striatum5.31 ± 0.44
Subthalamus4.58 ± 0.08
Temporal Lobe4.63 ± 0.45
Thalamus4.98 ± 0.41
White Matter5.79 ± 0.56
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
4933424A10RikCBCerebellum3.42
4.85
4933424A10RikCTXCerebral cortex0.87
0.96
4933424A10RikHIPHippocampal region1.47
2.12
4933424A10RikHPFHippocampal formation1.2
1.61
4933424A10RikHYHypothalamus0.36
0.46
4933424A10RikLSXLateral septal complex0.3
0.39
4933424A10RikMBMidbrain0.47
1.18
4933424A10RikMYMedulla0.6
0.78
4933424A10RikOLFOlfactory bulb2.6
2.7
4933424A10RikPPons0.48
0.97
4933424A10RikPALPallidum0.64
0.72
4933424A10RikRHPRetrohippocampal region0.68
0.75
4933424A10RiksAMYStriatum-like amygdalar nuclei0.24
0.26
4933424A10RikSTRStriatum0.39
0.35
4933424A10RikSTRdStriatum dorsal region0.35
0.31
4933424A10RikSTRvStriatum ventral region0.7
0.55
4933424A10RikTHThalamus0.41
0.59
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00011312 10 487 496 RLSSYTECYK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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