AutismKB 2.0

Annotation Detail for NARG2


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Basic Information Top
Gene Symbol:NARG2 ( BRCC1 )
Gene Full Name: NMDA receptor regulated 2
Band: 15q22.2
Quick LinksEntrez ID:79664; OMIM: 610835; Uniprot ID:NARG2_HUMAN; ENSEMBL ID: ENSG00000128915; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst9 / 62319144
fetus35 / 56401262
neonate2 / 3109764
infant0 / 236200 
juvenile1 / 5555617
adult75 / 193912138
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor6 / 9417863
cervical tumor2 / 3436658
chondrosarcoma3 / 8282336
colorectal tumor1 / 1142468
esophageal tumor1 / 1729057
gastrointestinal tumor1 / 1193698
germ cell tumor23 / 26384587
glioma0 / 1068830 
head and neck tumor10 / 13630273
kidney tumor4 / 6895958
leukemia4 / 9584241
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia6 / 9725061
normal148 / 336030744
ovarian tumor3 / 7668239
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer3 / 10268029
retinoblastoma3 / 4635664
skin tumor1 / 1249498
soft tissue/muscle tissue tumor10 / 12519179
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites0 / 400150 
bladder1 / 2975733
blood3 / 12347824
bone3 / 7165541
bone marrow3 / 4880161
brain39 / 110098935
cervix5 / 48171103
connective tissue11 / 14925573
ear2 / 16212123
embryonic tissue19 / 21572288
esophagus1 / 2020949
eye9 / 21105442
heart0 / 896260 
intestine5 / 23447221
kidney14 / 21177766
larynx1 / 2414541
liver3 / 20774314
lung9 / 33697426
lymph0 / 442700 
lymph node6 / 9161065
mammary gland14 / 15327191
mouth8 / 67052119
muscle2 / 10771518
nerve1 / 1576863
ovary4 / 10205139
pancreas6 / 21481227
parathyroid2 / 2053997
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta14 / 28082549
prostate6 / 18934531
salivary gland2 / 2015599
skin2 / 2105749
spleen0 / 539520 
stomach0 / 966190 
testis29 / 33044287
thymus10 / 81131123
thyroid1 / 4747321
tonsil0 / 169990 
trachea14 / 52413267
umbilical cord0 / 136800 
uterus16 / 23287868
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218713_at
Cell line Expression level Expression bar
721_B_lymphoblasts65.95
Adipocyte9.75
AdrenalCortex10.6
Adrenalgland7.5
Amygdala10
Appendix11
AtrioventricularNode8.8
BDCA4+_DentriticCells51.05
Bonemarrow9.25
BronchialEpithelialCells12.6
CD105+_Endothelial56.5
CD14+_Monocytes16.55
CD19+_BCells(neg._sel.)36.3
CD33+_Myeloid40.75
CD34+55.25
CD4+_Tcells29.85
CD56+_NKCells73.75
CD71+_EarlyErythroid15.45
CD8+_Tcells52.65
CardiacMyocytes13.05
Caudatenucleus8.45
Cerebellum6.95
CerebellumPeduncles10.8
CiliaryGanglion9.05
CingulateCortex9.35
Colorectaladenocarcinoma12.9
DorsalRootGanglion8
FetalThyroid9.95
Fetalbrain8.25
Fetalliver8.4
Fetallung7.1
GlobusPallidus7.05
Heart11.75
Hypothalamus10
Kidney7.75
Leukemia_chronicMyelogenousK-56210.75
Leukemia_promyelocytic-HL-6018.2
Leukemialymphoblastic(MOLT-4)29.45
Liver12.6
Lung9.15
Lymphnode10.25
Lymphoma_burkitts(Daudi)24.8
Lymphoma_burkitts(Raji)14.65
MedullaOblongata8.1
OccipitalLobe8.1
OlfactoryBulb7.1
Ovary8
Pancreas7.75
PancreaticIslet10.4
ParietalLobe9.4
Pituitary25.55
Placenta7.85
Pons12.8
PrefrontalCortex12.3
Prostate10.9
Salivarygland7.65
SkeletalMuscle12.95
Skin8.25
SmoothMuscle10.1
Spinalcord9.55
SubthalamicNucleus8.7
SuperiorCervicalGanglion15.35
TemporalLobe11
Testis7
TestisGermCell8.15
TestisIntersitial7.8
TestisLeydigCell9.3
TestisSeminiferousTubule7.65
Thalamus9.65
Thymus7.15
Thyroid36.95
Tongue10
Tonsil9
Trachea7.15
TrigeminalGanglion12.1
Uterus19.45
UterusCorpus8.5
WholeBlood18
Wholebrain6.4
colon9.9
pineal_day11.7
pineal_night11.14
retina10.575
small_intestine8.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P914972
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.17 ± 1.02
Basal Forebrain1.71 ± 0.2
Basal Part of Pons1.39 ± 0.32
Cerebellar Cortex1.6 ± 0.76
Cerebellar Nuclei2 ± 0.72
Claustrum2.57 ± 0.81
Epithalamus1.43 ± 0.72
Frontal Lobe1.58 ± 0.65
Globus Pallidus2.38 ± 0.37
Hypothalamus1.82 ± 0.66
Insula1.77 ± 0.76
Limbic Lobe1.72 ± 0.61
Mesencephalon1.92 ± 0.84
Myelencephalon1.74 ± 0.66
Occipital Lobe1.74 ± 0.55
Parietal Lobe1.74 ± 0.67
Pontine Tegmentum1.74 ± 0.52
Striatum1.92 ± 0.66
Subthalamus1.88 ± 0.68
Temporal Lobe1.58 ± 0.6
Thalamus1.71 ± 0.63
White Matter2.3 ± 0.34
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Narg2CBCerebellum1.24
1.61
Narg2CTXCerebral cortex0.62
0.86
Narg2HIPHippocampal region0.78
1.08
Narg2HPFHippocampal formation0.68
0.83
Narg2HYHypothalamus1.13
2.73
Narg2LSXLateral septal complex0.15
0.1
Narg2MBMidbrain0.78
1.01
Narg2MYMedulla1.28
1.21
Narg2OLFOlfactory bulb0.51
0.67
Narg2PPons0.83
1.08
Narg2PALPallidum0.17
0.19
Narg2RHPRetrohippocampal region0.34
0.33
Narg2sAMYStriatum-like amygdalar nuclei0.42
0.42
Narg2STRStriatum0.31
0.38
Narg2STRdStriatum dorsal region0.33
0.41
Narg2STRvStriatum ventral region0.23
0.37
Narg2THThalamus8.82
11.91
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00538234 25 51 75 IGENLNASASSVENEPAVSSATQAK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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