AutismKB 2.0

Annotation Detail for QTRTD1


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Basic Information Top
Gene Symbol:QTRTD1 ( FLJ12960 )
Gene Full Name: queuine tRNA-ribosyltransferase domain containing 1
Band: 3q13.31
Quick LinksEntrez ID:79691; OMIM: NA; Uniprot ID:QTRD1_HUMAN; ENSEMBL ID: ENSG00000151576; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst4 / 6231964
fetus7 / 56401212
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult52 / 193912126
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor5 / 11424643
esophageal tumor1 / 1729057
gastrointestinal tumor3 / 11936925
germ cell tumor15 / 26384556
glioma0 / 1068830 
head and neck tumor13 / 13630295
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia3 / 9725030
normal63 / 336030718
ovarian tumor4 / 7668252
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS7 / 12568055
prostate cancer4 / 10268038
retinoblastoma1 / 4635621
skin tumor1 / 1249498
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites3 / 4001574
bladder0 / 297570 
blood2 / 12347816
bone1 / 7165513
bone marrow2 / 4880140
brain12 / 110098910
cervix0 / 481710 
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue13 / 21572260
esophagus1 / 2020949
eye1 / 2110544
heart0 / 896260 
intestine9 / 23447238
kidney10 / 21177747
larynx2 / 2414582
liver0 / 2077430 
lung6 / 33697417
lymph1 / 4427022
lymph node3 / 9161032
mammary gland8 / 15327152
mouth8 / 67052119
muscle1 / 1077159
nerve0 / 157680 
ovary2 / 10205119
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta2 / 2808257
prostate6 / 18934531
salivary gland1 / 2015549
skin1 / 2105744
spleen2 / 5395237
stomach0 / 966190 
testis25 / 33044275
thymus3 / 8113136
thyroid2 / 4747342
tonsil0 / 169990 
trachea5 / 5241395
umbilical cord0 / 136800 
uterus7 / 23287830
vascular4 / 5178077
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219178_at
Cell line Expression level Expression bar
721_B_lymphoblasts54.95
Adipocyte10.25
AdrenalCortex13.1
Adrenalgland9.75
Amygdala10.8
Appendix14.35
AtrioventricularNode13.95
BDCA4+_DentriticCells15.2
Bonemarrow12.2
BronchialEpithelialCells13.85
CD105+_Endothelial11.6
CD14+_Monocytes12.85
CD19+_BCells(neg._sel.)12.2
CD33+_Myeloid26.95
CD34+18.95
CD4+_Tcells16.1
CD56+_NKCells12.45
CD71+_EarlyErythroid10
CD8+_Tcells11.9
CardiacMyocytes14.8
Caudatenucleus9.3
Cerebellum8
CerebellumPeduncles12.55
CiliaryGanglion12.15
CingulateCortex10.85
Colorectaladenocarcinoma26.05
DorsalRootGanglion9
FetalThyroid11.55
Fetalbrain9.15
Fetalliver9.25
Fetallung9.6
GlobusPallidus8.35
Heart18.6
Hypothalamus9.8
Kidney9.1
Leukemia_chronicMyelogenousK-5629.55
Leukemia_promyelocytic-HL-6010.85
Leukemialymphoblastic(MOLT-4)8.5
Liver16.05
Lung12.35
Lymphnode8.4
Lymphoma_burkitts(Daudi)19.65
Lymphoma_burkitts(Raji)18.1
MedullaOblongata10.15
OccipitalLobe9.25
OlfactoryBulb8.05
Ovary7.8
Pancreas9.6
PancreaticIslet12.25
ParietalLobe11.55
Pituitary12.9
Placenta10.5
Pons10.55
PrefrontalCortex13.1
Prostate12.1
Salivarygland9.1
SkeletalMuscle14.55
Skin9.45
SmoothMuscle12.05
Spinalcord11.4
SubthalamicNucleus11.05
SuperiorCervicalGanglion19.75
TemporalLobe10.35
Testis8.6
TestisGermCell8.75
TestisIntersitial9.2
TestisLeydigCell11.35
TestisSeminiferousTubule9.55
Thalamus11.25
Thymus7.1
Thyroid12.65
Tongue12.45
Tonsil12.5
Trachea9.15
TrigeminalGanglion15.85
Uterus9.85
UterusCorpus11.45
WholeBlood15.3
Wholebrain7.6
colon11.25
pineal_day18.5
pineal_night19.36
retina13.4
small_intestine10.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_2187_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.87 ± 0.3
Basal Forebrain6.87 ± 0.19
Basal Part of Pons6.77 ± 0.24
Cerebellar Cortex6.59 ± 0.12
Cerebellar Nuclei6.99 ± 0.17
Claustrum6.86 ± 0.39
Epithalamus6.85 ± 0.33
Frontal Lobe6.77 ± 0.29
Globus Pallidus7.43 ± 0.18
Hypothalamus6.68 ± 0.27
Insula6.72 ± 0.24
Limbic Lobe6.97 ± 0.27
Mesencephalon6.85 ± 0.31
Myelencephalon6.85 ± 0.27
Occipital Lobe7.09 ± 0.37
Parietal Lobe6.82 ± 0.27
Pontine Tegmentum6.92 ± 0.33
Striatum7.25 ± 0.28
Subthalamus6.79 ± 0.23
Temporal Lobe6.74 ± 0.23
Thalamus6.89 ± 0.22
White Matter7.73 ± 0.2
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Qtrtd1CBCerebellum4.01
4.76
Qtrtd1CTXCerebral cortex2.29
1.73
Qtrtd1HIPHippocampal region4.47
3.85
Qtrtd1HPFHippocampal formation4.3
3.51
Qtrtd1HYHypothalamus0.98
0.89
Qtrtd1LSXLateral septal complex0.54
0.72
Qtrtd1MBMidbrain1.25
1.19
Qtrtd1MYMedulla5.06
5.02
Qtrtd1OLFOlfactory bulb2.4
1.75
Qtrtd1PPons2.55
2.68
Qtrtd1PALPallidum1.42
1.24
Qtrtd1RHPRetrohippocampal region4.09
3.09
Qtrtd1sAMYStriatum-like amygdalar nuclei2.52
1.76
Qtrtd1STRStriatum1.08
0.92
Qtrtd1STRdStriatum dorsal region0.79
0.74
Qtrtd1STRvStriatum ventral region1.37
0.99
Qtrtd1THThalamus0.93
0.75
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00096417 17 250 266 LISGVSRPDEVLECIER Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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