AutismKB 2.0

Annotation Detail for C11orf80


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Basic Information Top
Gene Symbol:C11orf80 ( FLJ22531 )
Gene Full Name: chromosome 11 open reading frame 80
Band: 11q13.2
Quick LinksEntrez ID:79703; OMIM: NA; Uniprot ID:CK080_HUMAN; ENSEMBL ID: ENSG00000173715; HGNC ID: 26197
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst0 / 623190 
fetus22 / 56401239
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult61 / 193912131
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor5 / 9417853
cervical tumor0 / 343660 
chondrosarcoma3 / 8282336
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor7 / 26384526
glioma2 / 10688318
head and neck tumor3 / 13630222
kidney tumor1 / 6895914
leukemia8 / 9584283
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia1 / 9725010
normal98 / 336030729
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer6 / 10268058
retinoblastoma2 / 4635643
skin tumor1 / 1249498
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland3 / 3319790
ascites1 / 4001524
bladder0 / 297570 
blood1 / 1234788
bone3 / 7165541
bone marrow0 / 488010 
brain24 / 110098921
cervix0 / 481710 
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue6 / 21572227
esophagus0 / 202090 
eye10 / 21105447
heart1 / 8962611
intestine10 / 23447242
kidney9 / 21177742
larynx1 / 2414541
liver2 / 2077439
lung12 / 33697435
lymph0 / 442700 
lymph node5 / 9161054
mammary gland6 / 15327139
mouth2 / 6705229
muscle0 / 1077150 
nerve2 / 15768126
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid3 / 20539146
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta9 / 28082532
prostate12 / 18934563
salivary gland0 / 201550 
skin2 / 2105749
spleen1 / 5395218
stomach2 / 9661920
testis14 / 33044242
thymus4 / 8113149
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus9 / 23287838
vascular0 / 517800 
Microarray in BioGPS Top
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  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204922_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.9
Adipocyte5.55
AdrenalCortex6.2
Adrenalgland4.95
Amygdala6.3
Appendix5.8
AtrioventricularNode4.8
BDCA4+_DentriticCells8.15
Bonemarrow6.15
BronchialEpithelialCells5.65
CD105+_Endothelial5.7
CD14+_Monocytes6.2
CD19+_BCells(neg._sel.)6.55
CD33+_Myeloid7
CD34+7.05
CD4+_Tcells6.45
CD56+_NKCells6.8
CD71+_EarlyErythroid5.65
CD8+_Tcells5.8
CardiacMyocytes7.45
Caudatenucleus5.25
Cerebellum4.8
CerebellumPeduncles6.9
CiliaryGanglion4.05
CingulateCortex6.1
Colorectaladenocarcinoma6.05
DorsalRootGanglion4.5
FetalThyroid5.6
Fetalbrain5.95
Fetalliver5.1
Fetallung4.45
GlobusPallidus4.45
Heart8.45
Hypothalamus6.45
Kidney5
Leukemia_chronicMyelogenousK-5625.3
Leukemia_promyelocytic-HL-605.05
Leukemialymphoblastic(MOLT-4)7.3
Liver7.95
Lung6.4
Lymphnode5.15
Lymphoma_burkitts(Daudi)7.85
Lymphoma_burkitts(Raji)8.2
MedullaOblongata5.45
OccipitalLobe5.15
OlfactoryBulb4.5
Ovary3.8
Pancreas4.65
PancreaticIslet6.15
ParietalLobe6.4
Pituitary6.9
Placenta5.7
Pons5.5
PrefrontalCortex7.45
Prostate7.9
Salivarygland4.7
SkeletalMuscle7.5
Skin4.75
SmoothMuscle6.6
Spinalcord6.25
SubthalamicNucleus5.25
SuperiorCervicalGanglion6.8
TemporalLobe5.3
Testis5.1
TestisGermCell4.85
TestisIntersitial5.15
TestisLeydigCell5.85
TestisSeminiferousTubule5.05
Thalamus6.05
Thymus4.75
Thyroid7
Tongue6.7
Tonsil5.8
Trachea4.95
TrigeminalGanglion5.75
Uterus4.6
UterusCorpus5.4
WholeBlood6.25
Wholebrain5.15
colon5.95
pineal_day6.98
pineal_night6.88
retina7.1
small_intestine5.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_4810_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.63 ± 0.68
Basal Forebrain5.72 ± 0.28
Basal Part of Pons5.33 ± 0.52
Cerebellar Cortex5.98 ± 0.25
Cerebellar Nuclei4.75 ± 0.54
Claustrum5.95 ± 0.4
Epithalamus5.15 ± 0.65
Frontal Lobe5.31 ± 0.51
Globus Pallidus3.89 ± 0.88
Hypothalamus5.85 ± 0.58
Insula5.68 ± 0.32
Limbic Lobe5.38 ± 0.56
Mesencephalon5.48 ± 0.61
Myelencephalon5.34 ± 0.61
Occipital Lobe5.42 ± 0.44
Parietal Lobe5.36 ± 0.47
Pontine Tegmentum5.26 ± 0.72
Striatum4.69 ± 0.54
Subthalamus5.35 ± 0.55
Temporal Lobe5.58 ± 0.44
Thalamus5.29 ± 0.49
White Matter3.88 ± 0.58
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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