Annotation Detail for AAGAB


Gene Symbol: | AAGAB ( DKFZp667D2317,DKFZp686G08119,FLJ11506,p34 ) |
---|---|
Gene Full Name: | alpha- and gamma-adaptin binding protein |
Band: | 15q23 |
Quick Links | Entrez ID:79719; OMIM: NA; Uniprot ID:AAGAB_HUMAN; ENSEMBL ID: ENSG00000103591; HGNC ID: 25662 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.254642
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
embryoid body | 2 / 70761 | 28 | ![]() |
blastocyst | 4 / 62319 | 64 | ![]() |
fetus | 27 / 564012 | 47 | ![]() |
neonate | 3 / 31097 | 96 | ![]() |
infant | 3 / 23620 | 127 | ![]() |
juvenile | 4 / 55556 | 71 | ![]() |
adult | 113 / 1939121 | 58 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adrenal tumor | 0 / 12794 | 0 | |
bladder carcinoma | 0 / 17475 | 0 | |
breast (mammary gland) tumor | 11 / 94178 | 116 | ![]() |
cervical tumor | 1 / 34366 | 29 | ![]() |
chondrosarcoma | 3 / 82823 | 36 | ![]() |
colorectal tumor | 11 / 114246 | 96 | ![]() |
esophageal tumor | 5 / 17290 | 289 | ![]() |
gastrointestinal tumor | 5 / 119369 | 41 | ![]() |
germ cell tumor | 26 / 263845 | 98 | ![]() |
glioma | 7 / 106883 | 65 | ![]() |
head and neck tumor | 6 / 136302 | 44 | ![]() |
kidney tumor | 4 / 68959 | 58 | ![]() |
leukemia | 11 / 95842 | 114 | ![]() |
liver tumor | 13 / 96359 | 134 | ![]() |
lung tumor | 4 / 103127 | 38 | ![]() |
lymphoma | 4 / 71755 | 55 | ![]() |
non-neoplasia | 8 / 97250 | 82 | ![]() |
normal | 199 / 3360307 | 59 | ![]() |
ovarian tumor | 1 / 76682 | 13 | ![]() |
pancreatic tumor | 8 / 104616 | 76 | ![]() |
primitive neuroectodermal tumor of the CNS | 16 / 125680 | 127 | ![]() |
prostate cancer | 9 / 102680 | 87 | ![]() |
retinoblastoma | 2 / 46356 | 43 | ![]() |
skin tumor | 2 / 124949 | 16 | ![]() |
soft tissue/muscle tissue tumor | 7 / 125191 | 55 | ![]() |
uterine tumor | 4 / 90257 | 44 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adipose tissue | 1 / 13106 | 76 | ![]() |
adrenal gland | 1 / 33197 | 30 | ![]() |
ascites | 1 / 40015 | 24 | ![]() |
bladder | 1 / 29757 | 33 | ![]() |
blood | 10 / 123478 | 80 | ![]() |
bone | 5 / 71655 | 69 | ![]() |
bone marrow | 4 / 48801 | 81 | ![]() |
brain | 74 / 1100989 | 67 | ![]() |
cervix | 2 / 48171 | 41 | ![]() |
connective tissue | 3 / 149255 | 20 | ![]() |
ear | 0 / 16212 | 0 | |
embryonic tissue | 24 / 215722 | 111 | ![]() |
esophagus | 5 / 20209 | 247 | ![]() |
eye | 15 / 211054 | 71 | ![]() |
heart | 5 / 89626 | 55 | ![]() |
intestine | 30 / 234472 | 127 | ![]() |
kidney | 13 / 211777 | 61 | ![]() |
larynx | 0 / 24145 | 0 | |
liver | 13 / 207743 | 62 | ![]() |
lung | 21 / 336974 | 62 | ![]() |
lymph | 0 / 44270 | 0 | |
lymph node | 1 / 91610 | 10 | ![]() |
mammary gland | 14 / 153271 | 91 | ![]() |
mouth | 4 / 67052 | 59 | ![]() |
muscle | 3 / 107715 | 27 | ![]() |
nerve | 0 / 15768 | 0 | |
ovary | 2 / 102051 | 19 | ![]() |
pancreas | 9 / 214812 | 41 | ![]() |
parathyroid | 3 / 20539 | 146 | ![]() |
pharynx | 4 / 41328 | 96 | ![]() |
pituitary gland | 2 / 16585 | 120 | ![]() |
placenta | 11 / 280825 | 39 | ![]() |
prostate | 11 / 189345 | 58 | ![]() |
salivary gland | 0 / 20155 | 0 | |
skin | 12 / 210574 | 56 | ![]() |
spleen | 1 / 53952 | 18 | ![]() |
stomach | 6 / 96619 | 62 | ![]() |
testis | 21 / 330442 | 63 | ![]() |
thymus | 4 / 81131 | 49 | ![]() |
thyroid | 1 / 47473 | 21 | ![]() |
tonsil | 0 / 16999 | 0 | |
trachea | 0 / 52413 | 0 | |
umbilical cord | 2 / 13680 | 146 | ![]() |
uterus | 13 / 232878 | 55 | ![]() |
vascular | 1 / 51780 | 19 | ![]() |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 202852_s_at
Cell line | Expression level | Expression bar |
---|---|---|
![]() | ||
721_B_lymphoblasts | 43.95 | ![]() |
Adipocyte | 9.05 | ![]() |
AdrenalCortex | 8.8 | ![]() |
Adrenalgland | 6.5 | ![]() |
Amygdala | 8.4 | ![]() |
Appendix | 7.65 | ![]() |
AtrioventricularNode | 5.85 | ![]() |
BDCA4+_DentriticCells | 25.2 | ![]() |
Bonemarrow | 8.6 | ![]() |
BronchialEpithelialCells | 34.3 | ![]() |
CD105+_Endothelial | 15.15 | ![]() |
CD14+_Monocytes | 17.8 | ![]() |
CD19+_BCells(neg._sel.) | 11.05 | ![]() |
CD33+_Myeloid | 17.6 | ![]() |
CD34+ | 13 | ![]() |
CD4+_Tcells | 16.55 | ![]() |
CD56+_NKCells | 45.4 | ![]() |
CD71+_EarlyErythroid | 25.25 | ![]() |
CD8+_Tcells | 14.35 | ![]() |
CardiacMyocytes | 9.45 | ![]() |
Caudatenucleus | 6.95 | ![]() |
Cerebellum | 6.1 | ![]() |
CerebellumPeduncles | 8.55 | ![]() |
CiliaryGanglion | 5.4 | ![]() |
CingulateCortex | 8.45 | ![]() |
Colorectaladenocarcinoma | 7.55 | ![]() |
DorsalRootGanglion | 5.8 | ![]() |
FetalThyroid | 9.4 | ![]() |
Fetalbrain | 7.35 | ![]() |
Fetalliver | 6.55 | ![]() |
Fetallung | 6.95 | ![]() |
GlobusPallidus | 7.85 | ![]() |
Heart | 9.8 | ![]() |
Hypothalamus | 8.3 | ![]() |
Kidney | 6.8 | ![]() |
Leukemia_chronicMyelogenousK-562 | 9.8 | ![]() |
Leukemia_promyelocytic-HL-60 | 11.75 | ![]() |
Leukemialymphoblastic(MOLT-4) | 9.3 | ![]() |
Liver | 10.85 | ![]() |
Lung | 8.1 | ![]() |
Lymphnode | 6.5 | ![]() |
Lymphoma_burkitts(Daudi) | 18.45 | ![]() |
Lymphoma_burkitts(Raji) | 10.8 | ![]() |
MedullaOblongata | 7.65 | ![]() |
OccipitalLobe | 7.25 | ![]() |
OlfactoryBulb | 5.9 | ![]() |
Ovary | 4.95 | ![]() |
Pancreas | 8.3 | ![]() |
PancreaticIslet | 11.1 | ![]() |
ParietalLobe | 8.5 | ![]() |
Pituitary | 11.65 | ![]() |
Placenta | 7.5 | ![]() |
Pons | 7.1 | ![]() |
PrefrontalCortex | 9.65 | ![]() |
Prostate | 9.2 | ![]() |
Salivarygland | 6.05 | ![]() |
SkeletalMuscle | 8.8 | ![]() |
Skin | 6.55 | ![]() |
SmoothMuscle | 9.5 | ![]() |
Spinalcord | 9.7 | ![]() |
SubthalamicNucleus | 7.3 | ![]() |
SuperiorCervicalGanglion | 8.5 | ![]() |
TemporalLobe | 7.2 | ![]() |
Testis | 6.65 | ![]() |
TestisGermCell | 6.65 | ![]() |
TestisIntersitial | 6.2 | ![]() |
TestisLeydigCell | 7.45 | ![]() |
TestisSeminiferousTubule | 7.3 | ![]() |
Thalamus | 7.75 | ![]() |
Thymus | 7.4 | ![]() |
Thyroid | 13.55 | ![]() |
Tongue | 8.1 | ![]() |
Tonsil | 7.4 | ![]() |
Trachea | 6.35 | ![]() |
TrigeminalGanglion | 8.25 | ![]() |
Uterus | 6.9 | ![]() |
UterusCorpus | 6.45 | ![]() |
WholeBlood | 19.8 | ![]() |
Wholebrain | 7.85 | ![]() |
colon | 15.05 | ![]() |
pineal_day | 22.24 | ![]() |
pineal_night | 16.16 | ![]() |
retina | 9.3 | ![]() |
small_intestine | 10 | ![]() |
- Probe name: CUST_7640_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 7.49 ± 0.33 | ![]() ![]() ![]() |
Basal Forebrain | 7.44 ± 0.23 | ![]() ![]() ![]() |
Basal Part of Pons | 7.9 ± 0.31 | ![]() ![]() ![]() |
Cerebellar Cortex | 7.25 ± 0.28 | ![]() ![]() ![]() |
Cerebellar Nuclei | 7.69 ± 0.36 | ![]() ![]() ![]() |
Claustrum | 7.98 ± 0.43 | ![]() ![]() ![]() |
Epithalamus | 7.34 ± 0.42 | ![]() ![]() ![]() |
Frontal Lobe | 7.6 ± 0.41 | ![]() ![]() ![]() |
Globus Pallidus | 7.37 ± 0.36 | ![]() ![]() ![]() |
Hypothalamus | 7.7 ± 0.28 | ![]() ![]() ![]() |
Insula | 7.55 ± 0.21 | ![]() ![]() ![]() |
Limbic Lobe | 7.65 ± 0.45 | ![]() ![]() ![]() |
Mesencephalon | 7.64 ± 0.47 | ![]() ![]() ![]() |
Myelencephalon | 7.55 ± 0.39 | ![]() ![]() ![]() |
Occipital Lobe | 7.7 ± 0.33 | ![]() ![]() ![]() |
Parietal Lobe | 7.72 ± 0.38 | ![]() ![]() ![]() |
Pontine Tegmentum | 7.59 ± 0.29 | ![]() ![]() ![]() |
Striatum | 7.43 ± 0.4 | ![]() ![]() ![]() |
Subthalamus | 7.82 ± 0.23 | ![]() ![]() ![]() |
Temporal Lobe | 7.54 ± 0.28 | ![]() ![]() ![]() |
Thalamus | 7.76 ± 0.28 | ![]() ![]() ![]() |
White Matter | 6.72 ± 0.44 | ![]() ![]() ![]() |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
2310007F21Rik | CB | Cerebellum | 56.04 | ![]() |
80.17 | ![]() | |||
2310007F21Rik | CTX | Cerebral cortex | 76.11 | ![]() |
57.1 | ![]() | |||
2310007F21Rik | HIP | Hippocampal region | 63.9 | ![]() |
87.33 | ![]() | |||
2310007F21Rik | HPF | Hippocampal formation | 58.96 | ![]() |
65.65 | ![]() | |||
2310007F21Rik | HY | Hypothalamus | 30.08 | ![]() |
22.27 | ![]() | |||
2310007F21Rik | LSX | Lateral septal complex | 66.73 | ![]() |
49.43 | ![]() | |||
2310007F21Rik | MB | Midbrain | 49.09 | ![]() |
41.33 | ![]() | |||
2310007F21Rik | MY | Medulla | 40.24 | ![]() |
40.39 | ![]() | |||
2310007F21Rik | OLF | Olfactory bulb | 52.11 | ![]() |
42.47 | ![]() | |||
2310007F21Rik | P | Pons | 37.13 | ![]() |
34.86 | ![]() | |||
2310007F21Rik | PAL | Pallidum | 33.73 | ![]() |
27.12 | ![]() | |||
2310007F21Rik | RHP | Retrohippocampal region | 53.36 | ![]() |
42.09 | ![]() | |||
2310007F21Rik | sAMY | Striatum-like amygdalar nuclei | 28.45 | ![]() |
18.85 | ![]() | |||
2310007F21Rik | STR | Striatum | 48.37 | ![]() |
33.23 | ![]() | |||
2310007F21Rik | STRd | Striatum dorsal region | 48.84 | ![]() |
33.79 | ![]() | |||
2310007F21Rik | STRv | Striatum ventral region | 54.13 | ![]() |
35.6 | ![]() | |||
2310007F21Rik | TH | Thalamus | 63.54 | ![]() |
51.83 | ![]() |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00069369 | 27 | 134 | 160 | HGFELVELSPEELPEEDDDFPESTGVK | Peptide Atlas |