AutismKB 2.0

Annotation Detail for THAP9


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Basic Information Top
Gene Symbol:THAP9 ( FLJ23320,FLJ34093 )
Gene Full Name: THAP domain containing 9
Band: 4q21.22
Quick LinksEntrez ID:79725; OMIM: 612537; Uniprot ID:THAP9_HUMAN; ENSEMBL ID: ENSG00000168152; HGNC ID: 23192
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst3 / 6231948
fetus12 / 56401221
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult8 / 19391214
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor3 / 26384511
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal36 / 336030710
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow0 / 488010 
brain12 / 110098910
cervix0 / 481710 
connective tissue1 / 1492556
ear1 / 1621261
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine3 / 23447212
kidney3 / 21177714
larynx0 / 241450 
liver2 / 2077439
lung1 / 3369742
lymph0 / 442700 
lymph node1 / 9161010
mammary gland1 / 1532716
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate1 / 1893455
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis14 / 33044242
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus2 / 2328788
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220360_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.35
Adipocyte7.75
AdrenalCortex11.35
Adrenalgland7.45
Amygdala7.75
Appendix11.45
AtrioventricularNode9.4
BDCA4+_DentriticCells8.15
Bonemarrow9.5
BronchialEpithelialCells7.65
CD105+_Endothelial7.8
CD14+_Monocytes9.25
CD19+_BCells(neg._sel.)8.45
CD33+_Myeloid11.55
CD34+9.55
CD4+_Tcells8.4
CD56+_NKCells8.9
CD71+_EarlyErythroid7.95
CD8+_Tcells6.9
CardiacMyocytes17.45
Caudatenucleus7.2
Cerebellum6.7
CerebellumPeduncles10.25
CiliaryGanglion8.3
CingulateCortex8.6
Colorectaladenocarcinoma7.95
DorsalRootGanglion8
FetalThyroid9.15
Fetalbrain7.5
Fetalliver7.35
Fetallung6.15
GlobusPallidus6.9
Heart15.3
Hypothalamus8.05
Kidney7.85
Leukemia_chronicMyelogenousK-5627.05
Leukemia_promyelocytic-HL-607.2
Leukemialymphoblastic(MOLT-4)6.2
Liver13.45
Lung8.75
Lymphnode6.4
Lymphoma_burkitts(Daudi)11
Lymphoma_burkitts(Raji)13.3
MedullaOblongata7.15
OccipitalLobe7.35
OlfactoryBulb6.35
Ovary7.4
Pancreas7.1
PancreaticIslet8.85
ParietalLobe9.6
Pituitary9.3
Placenta7.7
Pons8.3
PrefrontalCortex9.45
Prostate9.45
Salivarygland6.95
SkeletalMuscle14.05
Skin8.4
SmoothMuscle9.1
Spinalcord8.4
SubthalamicNucleus7.95
SuperiorCervicalGanglion13.7
TemporalLobe7.8
Testis6.75
TestisGermCell6.45
TestisIntersitial7.5
TestisLeydigCell8.75
TestisSeminiferousTubule6.95
Thalamus8.65
Thymus6.2
Thyroid9.3
Tongue9.9
Tonsil8.2
Trachea6.55
TrigeminalGanglion11.2
Uterus6.1
UterusCorpus9.85
WholeBlood8.75
Wholebrain6.1
colon7.9
pineal_day9.68
pineal_night9.66
retina9.7
small_intestine7.5
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_14887_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.18 ± 0.4
Basal Forebrain6.65 ± 0.3
Basal Part of Pons6.21 ± 0.34
Cerebellar Cortex6.26 ± 0.24
Cerebellar Nuclei6.57 ± 0.41
Claustrum6.23 ± 0.44
Epithalamus6.81 ± 0.26
Frontal Lobe6.22 ± 0.42
Globus Pallidus7.21 ± 0.28
Hypothalamus6.39 ± 0.25
Insula6.09 ± 0.21
Limbic Lobe6.17 ± 0.39
Mesencephalon6.47 ± 0.37
Myelencephalon6.36 ± 0.38
Occipital Lobe6.42 ± 0.31
Parietal Lobe6.34 ± 0.35
Pontine Tegmentum6.45 ± 0.36
Striatum6.47 ± 0.35
Subthalamus6.21 ± 0.21
Temporal Lobe6.17 ± 0.33
Thalamus6.38 ± 0.27
White Matter8.03 ± 0.3
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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