Annotation Detail for NSUN7
Basic Information Top
| Gene Symbol: | NSUN7 ( FLJ14001 ) |
|---|---|
| Gene Full Name: | NOP2/Sun domain family, member 7 |
| Band: | 4p14 |
| Quick Links | Entrez ID:79730; OMIM: NA; Uniprot ID:; ENSEMBL ID: ENSG00000179299; HGNC ID: 25857 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.570821
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 15 / 564012 | 26 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 8 / 1939121 | 4 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 36 / 3360307 | 10 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 6 / 90257 | 66 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 3 / 1100989 | 2 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 1 / 89626 | 11 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 31 / 330442 | 93 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 7 / 52413 | 133 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_32_P136269
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.37 ± 0.96 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.93 ± 0.52 | |
| Basal Part of Pons | 1.36 ± 0.38 | |
| Cerebellar Cortex | 1.56 ± 0.53 | |
| Cerebellar Nuclei | 2.17 ± 0.73 | |
| Claustrum | 2.73 ± 0.89 | |
| Epithalamus | 3.64 ± 1.06 | |
| Frontal Lobe | 1.71 ± 0.77 | |
| Globus Pallidus | 2.5 ± 0.56 | |
| Hypothalamus | 2.24 ± 1.04 | |
| Insula | 1.64 ± 0.53 | |
| Limbic Lobe | 1.8 ± 0.73 | |
| Mesencephalon | 2.06 ± 0.64 | |
| Myelencephalon | 1.94 ± 0.81 | |
| Occipital Lobe | 1.86 ± 0.58 | |
| Parietal Lobe | 1.8 ± 0.7 | |
| Pontine Tegmentum | 1.89 ± 0.73 | |
| Striatum | 2.38 ± 0.9 | |
| Subthalamus | 1.81 ± 0.53 | |
| Temporal Lobe | 1.79 ± 0.68 | |
| Thalamus | 1.81 ± 0.64 | |
| White Matter | 2.51 ± 0.42 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Nsun7 | CB | Cerebellum | 2.68 | |
| 3.24 | | |||
| Nsun7 | CTX | Cerebral cortex | 10.32 | |
| 7.65 | | |||
| Nsun7 | HIP | Hippocampal region | 18.95 | |
| 23.54 | | |||
| Nsun7 | HPF | Hippocampal formation | 14.56 | |
| 15.66 | | |||
| Nsun7 | HY | Hypothalamus | 3.15 | |
| 2.29 | | |||
| Nsun7 | LSX | Lateral septal complex | 20.21 | |
| 14.82 | | |||
| Nsun7 | MB | Midbrain | 6.47 | |
| 5.85 | | |||
| Nsun7 | MY | Medulla | 5.82 | |
| 5.32 | | |||
| Nsun7 | OLF | Olfactory bulb | 21.1 | |
| 15.46 | | |||
| Nsun7 | P | Pons | 3.92 | |
| 3.56 | | |||
| Nsun7 | PAL | Pallidum | 6.7 | |
| 5.45 | | |||
| Nsun7 | RHP | Retrohippocampal region | 7.02 | |
| 5.08 | | |||
| Nsun7 | sAMY | Striatum-like amygdalar nuclei | 5.44 | |
| 3.23 | | |||
| Nsun7 | STR | Striatum | 5.45 | |
| 3.81 | | |||
| Nsun7 | STRd | Striatum dorsal region | 3.03 | |
| 2.23 | | |||
| Nsun7 | STRv | Striatum ventral region | 9.06 | |
| 5.8 | | |||
| Nsun7 | TH | Thalamus | 9.86 | |
| 7.88 | |