AutismKB 2.0

Annotation Detail for C6orf103


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Basic Information Top
Gene Symbol:C6orf103 ( - )
Gene Full Name: chromosome 6 open reading frame 103
Band: 6q24.3
Quick LinksEntrez ID:79747; OMIM: NA; Uniprot ID:CAN7L_HUMAN; ENSEMBL ID: ENSG00000118492; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus3 / 5640125
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult33 / 193912117
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor3 / 26384511
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal28 / 33603078
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor31 / 125191247
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain1 / 11009890 
cervix0 / 481710 
connective tissue31 / 149255207
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung4 / 33697411
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis20 / 33044260
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea7 / 52413133
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220614_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts12.65
Adipocyte11.15
AdrenalCortex17.8
Adrenalgland10.75
Amygdala11.7
Appendix15.2
AtrioventricularNode13.05
BDCA4+_DentriticCells9.85
Bonemarrow12.65
BronchialEpithelialCells10.5
CD105+_Endothelial10.95
CD14+_Monocytes12.05
CD19+_BCells(neg._sel.)11.15
CD33+_Myeloid13.7
CD34+12.65
CD4+_Tcells11.2
CD56+_NKCells11.55
CD71+_EarlyErythroid11.1
CD8+_Tcells9.85
CardiacMyocytes17.3
Caudatenucleus10.2
Cerebellum9.6
CerebellumPeduncles13.95
CiliaryGanglion15.4
CingulateCortex12.15
Colorectaladenocarcinoma11.65
DorsalRootGanglion12.9
FetalThyroid12.05
Fetalbrain10.55
Fetalliver10.75
Fetallung9.1
GlobusPallidus9.1
Heart24.65
Hypothalamus12.05
Kidney11.5
Leukemia_chronicMyelogenousK-56210.55
Leukemia_promyelocytic-HL-609.65
Leukemialymphoblastic(MOLT-4)7.85
Liver17.6
Lung12.6
Lymphnode9.7
Lymphoma_burkitts(Daudi)15.4
Lymphoma_burkitts(Raji)17.95
MedullaOblongata10.5
OccipitalLobe10.4
OlfactoryBulb8.95
Ovary11.8
Pancreas9.8
PancreaticIslet12.4
ParietalLobe14.1
Pituitary14.1
Placenta10.7
Pons11.45
PrefrontalCortex13.7
Prostate12.8
Salivarygland9.8
SkeletalMuscle17.3
Skin16.35
SmoothMuscle13.15
Spinalcord12.4
SubthalamicNucleus11.05
SuperiorCervicalGanglion19.9
TemporalLobe10.95
Testis10.15
TestisGermCell21.55
TestisIntersitial55.1
TestisLeydigCell16.8
TestisSeminiferousTubule12.7
Thalamus12.1
Thymus8.9
Thyroid14.25
Tongue14.9
Tonsil13.15
Trachea9.8
TrigeminalGanglion17.25
Uterus8.65
UterusCorpus14.55
WholeBlood12.65
Wholebrain8.55
colon11.6
pineal_day13.32
pineal_night13.4
retina13.925
small_intestine11.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_4985_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.12 ± 1.08
Basal Forebrain1.3 ± 0.31
Basal Part of Pons1.31 ± 0.54
Cerebellar Cortex1.28 ± 0.77
Cerebellar Nuclei1.62 ± 0.74
Claustrum2.43 ± 0.94
Epithalamus3.36 ± 1.37
Frontal Lobe1.48 ± 0.89
Globus Pallidus2.27 ± 0.67
Hypothalamus1.49 ± 0.77
Insula1.86 ± 0.8
Limbic Lobe1.62 ± 0.98
Mesencephalon1.72 ± 0.76
Myelencephalon1.67 ± 0.9
Occipital Lobe1.66 ± 0.86
Parietal Lobe1.57 ± 0.89
Pontine Tegmentum1.74 ± 1.02
Striatum2.05 ± 0.94
Subthalamus1.73 ± 0.76
Temporal Lobe1.59 ± 0.89
Thalamus1.49 ± 0.74
White Matter1.32 ± 0.17
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
9130014G24RikCBCerebellum0.67
1.45
9130014G24RikCTXCerebral cortex0.69
1.1
9130014G24RikHIPHippocampal region0.45
0.74
9130014G24RikHPFHippocampal formation0.4
0.64
9130014G24RikHYHypothalamus0.17
0.3
9130014G24RikLSXLateral septal complex0.06
0
9130014G24RikMBMidbrain0.77
1.31
9130014G24RikMYMedulla0.42
0.51
9130014G24RikOLFOlfactory bulb0.31
0.62
9130014G24RikPPons0.25
0.24
9130014G24RikPALPallidum0.11
0.09
9130014G24RikRHPRetrohippocampal region0.24
0.32
9130014G24RiksAMYStriatum-like amygdalar nuclei0.06
0.13
9130014G24RikSTRStriatum0.19
0.3
9130014G24RikSTRdStriatum dorsal region0.26
0.41
9130014G24RikSTRvStriatum ventral region0.07
0.12
9130014G24RikTHThalamus0.23
0.21
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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