AutismKB 2.0

Annotation Detail for ASB13


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:ASB13 ( FLJ13134,MGC19879 )
Gene Full Name: ankyrin repeat and SOCS box-containing 13
Band: 10p15.1
Quick LinksEntrez ID:79754; OMIM: NA; Uniprot ID:ASB13_HUMAN; ENSEMBL ID: ENSG00000196372; HGNC ID: 19765
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst0 / 623190 
fetus15 / 56401226
neonate1 / 3109732
infant0 / 236200 
juvenile2 / 5555635
adult62 / 193912131
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma3 / 8282336
colorectal tumor5 / 11424643
esophageal tumor0 / 172900 
gastrointestinal tumor9 / 11936975
germ cell tumor11 / 26384541
glioma9 / 10688384
head and neck tumor3 / 13630222
kidney tumor6 / 6895987
leukemia5 / 9584252
liver tumor3 / 9635931
lung tumor5 / 10312748
lymphoma4 / 7175555
non-neoplasia3 / 9725030
normal84 / 336030724
ovarian tumor1 / 7668213
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor3 / 12494924
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites6 / 40015149
bladder0 / 297570 
blood5 / 12347840
bone2 / 7165527
bone marrow1 / 4880120
brain37 / 110098933
cervix4 / 4817183
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye9 / 21105442
heart2 / 8962622
intestine5 / 23447221
kidney19 / 21177789
larynx0 / 241450 
liver6 / 20774328
lung8 / 33697423
lymph0 / 442700 
lymph node11 / 91610120
mammary gland3 / 15327119
mouth0 / 670520 
muscle1 / 1077159
nerve1 / 1576863
ovary2 / 10205119
pancreas5 / 21481223
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta7 / 28082524
prostate1 / 1893455
salivary gland3 / 20155148
skin4 / 21057418
spleen0 / 539520 
stomach5 / 9661951
testis9 / 33044227
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus6 / 23287825
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218862_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.65
Adipocyte13.05
AdrenalCortex18.75
Adrenalgland23
Amygdala15.35
Appendix14.35
AtrioventricularNode6.9
BDCA4+_DentriticCells7.75
Bonemarrow12.65
BronchialEpithelialCells13.3
CD105+_Endothelial14
CD14+_Monocytes27.75
CD19+_BCells(neg._sel.)10.4
CD33+_Myeloid20.2
CD34+25.95
CD4+_Tcells13.9
CD56+_NKCells11.15
CD71+_EarlyErythroid11.9
CD8+_Tcells12.3
CardiacMyocytes18.35
Caudatenucleus11.05
Cerebellum22.45
CerebellumPeduncles35.7
CiliaryGanglion8.35
CingulateCortex13.5
Colorectaladenocarcinoma14.95
DorsalRootGanglion8.25
FetalThyroid12.8
Fetalbrain13.75
Fetalliver11.55
Fetallung9.55
GlobusPallidus8.75
Heart20.65
Hypothalamus19.75
Kidney34.7
Leukemia_chronicMyelogenousK-56224.45
Leukemia_promyelocytic-HL-6038.95
Leukemialymphoblastic(MOLT-4)10.8
Liver99.9
Lung25.8
Lymphnode12.05
Lymphoma_burkitts(Daudi)70.8
Lymphoma_burkitts(Raji)47.95
MedullaOblongata15
OccipitalLobe12.7
OlfactoryBulb9.75
Ovary8
Pancreas12.1
PancreaticIslet18.95
ParietalLobe14.15
Pituitary18.4
Placenta11.45
Pons12.2
PrefrontalCortex17.4
Prostate14.85
Salivarygland11.2
SkeletalMuscle14.85
Skin8.2
SmoothMuscle12.1
Spinalcord13.7
SubthalamicNucleus7.7
SuperiorCervicalGanglion13.9
TemporalLobe15.5
Testis18.25
TestisGermCell11.1
TestisIntersitial9.8
TestisLeydigCell11.8
TestisSeminiferousTubule10.9
Thalamus15.85
Thymus10.15
Thyroid14.65
Tongue19.25
Tonsil13.2
Trachea12.3
TrigeminalGanglion12.95
Uterus10.95
UterusCorpus11.65
WholeBlood14.8
Wholebrain33.15
colon20.6
pineal_day194.72
pineal_night290.2
retina110.7
small_intestine20.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P202510
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.16 ± 0.63
Basal Forebrain6.23 ± 0.31
Basal Part of Pons6.48 ± 0.31
Cerebellar Cortex6.39 ± 0.34
Cerebellar Nuclei6.72 ± 0.31
Claustrum6.57 ± 0.62
Epithalamus6.02 ± 0.2
Frontal Lobe6.22 ± 0.44
Globus Pallidus6.38 ± 0.43
Hypothalamus6.08 ± 0.36
Insula5.88 ± 0.42
Limbic Lobe6.25 ± 0.55
Mesencephalon6.3 ± 0.49
Myelencephalon6.35 ± 0.43
Occipital Lobe6.89 ± 0.45
Parietal Lobe6.51 ± 0.38
Pontine Tegmentum6.25 ± 0.44
Striatum5.84 ± 0.44
Subthalamus6.32 ± 0.16
Temporal Lobe6.24 ± 0.4
Thalamus6.61 ± 0.45
White Matter5.8 ± 0.65
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Asb13CBCerebellum27.34
36.74
Asb13CTXCerebral cortex77.86
68.22
Asb13HIPHippocampal region30.48
35.91
Asb13HPFHippocampal formation40.36
41.6
Asb13HYHypothalamus20.26
19.57
Asb13LSXLateral septal complex2.84
2.3
Asb13MBMidbrain47.42
55.65
Asb13MYMedulla54.74
85.91
Asb13OLFOlfactory bulb46.99
44.63
Asb13PPons53.11
81.94
Asb13PALPallidum31.37
38.29
Asb13RHPRetrohippocampal region53.22
46.95
Asb13sAMYStriatum-like amygdalar nuclei11.52
10.64
Asb13STRStriatum16.76
12.85
Asb13STRdStriatum dorsal region18.62
13.93
Asb13STRvStriatum ventral region18.2
13.71
Asb13THThalamus50.84
54.4
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved