Annotation Detail for GSTCD
Basic Information Top
| Gene Symbol: | GSTCD ( DKFZp686I10174,FLJ13273 ) |
|---|---|
| Gene Full Name: | glutathione S-transferase, C-terminal domain containing |
| Band: | 4q24 |
| Quick Links | Entrez ID:79807; OMIM: NA; Uniprot ID:GSTCD_HUMAN; ENSEMBL ID: ENSG00000138780; HGNC ID: 25806 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.161429
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 26 / 1939121 | 13 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 8 / 94178 | 84 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 54 / 3360307 | 16 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 9 / 1100989 | 8 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 1 / 211054 | 4 | |
| heart | 0 / 89626 | 0 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 18 / 330442 | 54 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P213038
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.45 ± 0.67 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.42 ± 0.48 | |
| Basal Part of Pons | 4.28 ± 0.28 | |
| Cerebellar Cortex | 4.72 ± 0.27 | |
| Cerebellar Nuclei | 3.99 ± 0.65 | |
| Claustrum | 3.81 ± 0.66 | |
| Epithalamus | 4.76 ± 0.32 | |
| Frontal Lobe | 4.21 ± 0.5 | |
| Globus Pallidus | 4.18 ± 0.7 | |
| Hypothalamus | 4.39 ± 0.54 | |
| Insula | 4.08 ± 0.66 | |
| Limbic Lobe | 4.23 ± 0.55 | |
| Mesencephalon | 4.34 ± 0.46 | |
| Myelencephalon | 4.31 ± 0.57 | |
| Occipital Lobe | 4.61 ± 0.47 | |
| Parietal Lobe | 4.19 ± 0.57 | |
| Pontine Tegmentum | 4.28 ± 0.58 | |
| Striatum | 4.32 ± 0.56 | |
| Subthalamus | 4.19 ± 0.26 | |
| Temporal Lobe | 4.3 ± 0.47 | |
| Thalamus | 4.32 ± 0.46 | |
| White Matter | 4.66 ± 0.18 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gstcd | CB | Cerebellum | 0.71 | |
| 1.5 | | |||
| Gstcd | CTX | Cerebral cortex | 1.02 | |
| 0.98 | | |||
| Gstcd | HIP | Hippocampal region | 0.45 | |
| 0.59 | | |||
| Gstcd | HPF | Hippocampal formation | 0.37 | |
| 0.46 | | |||
| Gstcd | HY | Hypothalamus | 0.56 | |
| 0.56 | | |||
| Gstcd | LSX | Lateral septal complex | 0.2 | |
| 0.16 | | |||
| Gstcd | MB | Midbrain | 3.31 | |
| 4.64 | | |||
| Gstcd | MY | Medulla | 0.92 | |
| 1.39 | | |||
| Gstcd | OLF | Olfactory bulb | 2.69 | |
| 2.93 | | |||
| Gstcd | P | Pons | 0.45 | |
| 0.81 | | |||
| Gstcd | PAL | Pallidum | 0.66 | |
| 0.74 | | |||
| Gstcd | RHP | Retrohippocampal region | 0.22 | |
| 0.21 | | |||
| Gstcd | sAMY | Striatum-like amygdalar nuclei | 0.21 | |
| 0.35 | | |||
| Gstcd | STR | Striatum | 0.36 | |
| 0.36 | | |||
| Gstcd | STRd | Striatum dorsal region | 0.31 | |
| 0.33 | | |||
| Gstcd | STRv | Striatum ventral region | 0.55 | |
| 0.42 | | |||
| Gstcd | TH | Thalamus | 0.69 | |
| 0.81 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00080264 | 15 | 221 | 235 | VHTQETSEGLDSSSK | Peptide Atlas |