Annotation Detail for ASAM
Basic Information Top
| Gene Symbol: | ASAM ( ACAM,CLMP,FLJ22415 ) |
|---|---|
| Gene Full Name: | - |
| Band: | 11q24.1 |
| Quick Links | Entrez ID:79827; OMIM: 611693; Uniprot ID:ACAM_HUMAN; ENSEMBL ID: ENSG00000166250; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591949
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 10 / 564012 | 17 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 19 / 1939121 | 9 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 2 / 34366 | 58 |  |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 48 / 3360307 | 14 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 11 / 1100989 | 9 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 10 / 149255 | 66 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 10 / 211054 | 47 | |
| heart | 0 / 89626 | 0 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 7 / 107715 | 64 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 4 / 330442 | 12 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: A_24_P270044
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.09 ± 0.99 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.25 ± 0.61 | |
| Basal Part of Pons | 3.66 ± 0.64 | |
| Cerebellar Cortex | 5.8 ± 0.45 | |
| Cerebellar Nuclei | 4.36 ± 0.95 | |
| Claustrum | 5.77 ± 1.3 | |
| Epithalamus | 3.87 ± 0.79 | |
| Frontal Lobe | 4.62 ± 0.89 | |
| Globus Pallidus | 4.86 ± 0.6 | |
| Hypothalamus | 4.22 ± 0.76 | |
| Insula | 4.04 ± 0.77 | |
| Limbic Lobe | 5.43 ± 1.38 | |
| Mesencephalon | 4.54 ± 1 | |
| Myelencephalon | 4.81 ± 1.21 | |
| Occipital Lobe | 6.21 ± 1.57 | |
| Parietal Lobe | 5.03 ± 0.78 | |
| Pontine Tegmentum | 5.05 ± 0.9 | |
| Striatum | 2.88 ± 0.86 | |
| Subthalamus | 4.09 ± 0.7 | |
| Temporal Lobe | 4.41 ± 0.88 | |
| Thalamus | 4.97 ± 1.07 | |
| White Matter | 4.41 ± 0.82 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 9030425E11Rik | CB | Cerebellum | 66.17 | |
| 83.29 | | |||
| 9030425E11Rik | CTX | Cerebral cortex | 96.72 | |
| 92.55 | | |||
| 9030425E11Rik | HIP | Hippocampal region | 69.13 | |
| 89.08 | | |||
| 9030425E11Rik | HPF | Hippocampal formation | 61.88 | |
| 82.64 | | |||
| 9030425E11Rik | HY | Hypothalamus | 59.18 | |
| 60.12 | | |||
| 9030425E11Rik | LSX | Lateral septal complex | 22.42 | |
| 17.15 | | |||
| 9030425E11Rik | MB | Midbrain | 45.74 | |
| 51.13 | | |||
| 9030425E11Rik | MY | Medulla | 50.85 | |
| 68.75 | | |||
| 9030425E11Rik | OLF | Olfactory bulb | 99.11 | |
| 100 | | |||
| 9030425E11Rik | P | Pons | 33.36 | |
| 41.73 | | |||
| 9030425E11Rik | PAL | Pallidum | 49.43 | |
| 50.28 | | |||
| 9030425E11Rik | RHP | Retrohippocampal region | 53.87 | |
| 56.72 | | |||
| 9030425E11Rik | sAMY | Striatum-like amygdalar nuclei | 77.01 | |
| 70.99 | | |||
| 9030425E11Rik | STR | Striatum | 62.87 | |
| 50.76 | | |||
| 9030425E11Rik | STRd | Striatum dorsal region | 63 | |
| 51.13 | | |||
| 9030425E11Rik | STRv | Striatum ventral region | 68.55 | |
| 48.56 | | |||
| 9030425E11Rik | TH | Thalamus | 80.99 | |
| 82.32 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00097260 | 31 | 31 | 61 | VTLPCHHQLGLPEKDTLDIEWLLTDNEGNQK | Peptide Atlas |