AutismKB 2.0

Annotation Detail for NAA40


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Basic Information Top
Gene Symbol:NAA40 ( FLJ13848,NAT11,PATT1 )
Gene Full Name: N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
Band: 11q13.1
Quick LinksEntrez ID:79829; OMIM: NA; Uniprot ID:NAA40_HUMAN; ENSEMBL ID: ENSG00000110583; HGNC ID: 25845
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body9 / 70761127
blastocyst7 / 62319112
fetus21 / 56401237
neonate0 / 310970 
infant0 / 236200 
juvenile2 / 5555635
adult75 / 193912138
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor2 / 3436658
chondrosarcoma1 / 8282312
colorectal tumor5 / 11424643
esophageal tumor0 / 172900 
gastrointestinal tumor6 / 11936950
germ cell tumor27 / 263845102
glioma3 / 10688328
head and neck tumor10 / 13630273
kidney tumor2 / 6895929
leukemia2 / 9584220
liver tumor2 / 9635920
lung tumor3 / 10312729
lymphoma4 / 7175555
non-neoplasia0 / 972500 
normal112 / 336030733
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer4 / 10268038
retinoblastoma5 / 46356107
skin tumor1 / 1249498
soft tissue/muscle tissue tumor7 / 12519155
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites4 / 4001599
bladder0 / 297570 
blood3 / 12347824
bone1 / 7165513
bone marrow1 / 4880120
brain52 / 110098947
cervix2 / 4817141
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue22 / 215722101
esophagus0 / 202090 
eye7 / 21105433
heart3 / 8962633
intestine8 / 23447234
kidney4 / 21177718
larynx1 / 2414541
liver4 / 20774319
lung6 / 33697417
lymph4 / 4427090
lymph node1 / 9161010
mammary gland9 / 15327158
mouth4 / 6705259
muscle8 / 10771574
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta8 / 28082528
prostate5 / 18934526
salivary gland4 / 20155198
skin2 / 2105749
spleen3 / 5395255
stomach0 / 966190 
testis28 / 33044284
thymus17 / 81131209
thyroid6 / 47473126
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus8 / 23287834
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218734_at
Cell line Expression level Expression bar
721_B_lymphoblasts26.3
Adipocyte3.4
AdrenalCortex3.55
Adrenalgland2.85
Amygdala3.7
Appendix3.45
AtrioventricularNode2.6
BDCA4+_DentriticCells19
Bonemarrow3.35
BronchialEpithelialCells3.45
CD105+_Endothelial3.75
CD14+_Monocytes3.7
CD19+_BCells(neg._sel.)10.2
CD33+_Myeloid4.5
CD34+9.1
CD4+_Tcells21.85
CD56+_NKCells11.1
CD71+_EarlyErythroid3.4
CD8+_Tcells19.3
CardiacMyocytes4.35
Caudatenucleus3.1
Cerebellum2.85
CerebellumPeduncles3.85
CiliaryGanglion2.35
CingulateCortex3.5
Colorectaladenocarcinoma3.95
DorsalRootGanglion2.6
FetalThyroid3.35
Fetalbrain9.7
Fetalliver2.95
Fetallung3.7
GlobusPallidus2.5
Heart4.35
Hypothalamus3.85
Kidney2.75
Leukemia_chronicMyelogenousK-5623.25
Leukemia_promyelocytic-HL-603.1
Leukemialymphoblastic(MOLT-4)11.6
Liver4.45
Lung3.75
Lymphnode3.9
Lymphoma_burkitts(Daudi)4.4
Lymphoma_burkitts(Raji)5
MedullaOblongata3.15
OccipitalLobe3.1
OlfactoryBulb2.7
Ovary2.25
Pancreas2.75
PancreaticIslet3.7
ParietalLobe3.6
Pituitary4.75
Placenta3.65
Pons3.25
PrefrontalCortex4.3
Prostate4.05
Salivarygland2.7
SkeletalMuscle3.9
Skin2.6
SmoothMuscle5.55
Spinalcord3.7
SubthalamicNucleus3.1
SuperiorCervicalGanglion3.85
TemporalLobe3.1
Testis3.1
TestisGermCell2.95
TestisIntersitial2.9
TestisLeydigCell3.35
TestisSeminiferousTubule2.95
Thalamus3.5
Thymus5.05
Thyroid7.3
Tongue3.35
Tonsil3.35
Trachea2.9
TrigeminalGanglion3.4
Uterus2.85
UterusCorpus3.05
WholeBlood3.8
Wholebrain3
colon3.45
pineal_day12.36
pineal_night12.62
retina4.2
small_intestine3.35
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P72466
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.78 ± 0.48
Basal Forebrain6.55 ± 0.19
Basal Part of Pons6.25 ± 0.37
Cerebellar Cortex6.67 ± 0.29
Cerebellar Nuclei6.44 ± 0.36
Claustrum6.99 ± 0.66
Epithalamus6.75 ± 0.31
Frontal Lobe6.25 ± 0.39
Globus Pallidus6.66 ± 0.3
Hypothalamus6.36 ± 0.26
Insula6.29 ± 0.39
Limbic Lobe6.6 ± 0.52
Mesencephalon6.38 ± 0.5
Myelencephalon6.44 ± 0.45
Occipital Lobe6.75 ± 0.5
Parietal Lobe6.49 ± 0.41
Pontine Tegmentum6.41 ± 0.4
Striatum6.12 ± 0.39
Subthalamus6.15 ± 0.18
Temporal Lobe6.33 ± 0.43
Thalamus6.33 ± 0.44
White Matter6.89 ± 0.24
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Nat11CBCerebellum22.36
26.49
Nat11CTXCerebral cortex45.74
32.11
Nat11HIPHippocampal region41.46
56.06
Nat11HPFHippocampal formation38.29
40.78
Nat11HYHypothalamus11.25
7.77
Nat11LSXLateral septal complex25.77
17.43
Nat11MBMidbrain16.12
12.66
Nat11MYMedulla21.46
19.22
Nat11OLFOlfactory bulb45.15
33.52
Nat11PPons18.03
15.62
Nat11PALPallidum21.03
15.56
Nat11RHPRetrohippocampal region33.55
22.52
Nat11sAMYStriatum-like amygdalar nuclei31.51
21.08
Nat11STRStriatum44.57
29.71
Nat11STRdStriatum dorsal region49.85
33.61
Nat11STRvStriatum ventral region44.77
27.99
Nat11THThalamus29.79
23.18
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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