AutismKB 2.0

Annotation Detail for TCTN2


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Basic Information Top
Gene Symbol:TCTN2 ( C12orf38,FLJ12975,TECT2 )
Gene Full Name: tectonic family member 2
Band: 12q24.31
Quick LinksEntrez ID:79867; OMIM: NA; Uniprot ID:TECT2_HUMAN; ENSEMBL ID: ENSG00000168778; HGNC ID: 25774
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus7 / 56401212
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult39 / 193912120
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor1 / 3436629
chondrosarcoma0 / 828230 
colorectal tumor9 / 11424678
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor4 / 26384515
glioma1 / 1068839
head and neck tumor2 / 13630214
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor2 / 9635920
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal32 / 33603079
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer5 / 10268048
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain23 / 110098920
cervix1 / 4817120
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine10 / 23447242
kidney10 / 21177747
larynx0 / 241450 
liver2 / 2077439
lung5 / 33697414
lymph0 / 442700 
lymph node0 / 916100 
mammary gland3 / 15327119
mouth2 / 6705229
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate5 / 18934526
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis3 / 3304429
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus8 / 23287834
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206438_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts72.45
Adipocyte229.8
AdrenalCortex356.4
Adrenalgland107.7
Amygdala129.5
Appendix495.95
AtrioventricularNode2059.2
BDCA4+_DentriticCells139.9
Bonemarrow127.9
BronchialEpithelialCells125.3
CD105+_Endothelial148.5
CD14+_Monocytes143.7
CD19+_BCells(neg._sel.)204.95
CD33+_Myeloid164.4
CD34+157.2
CD4+_Tcells120.7
CD56+_NKCells143.95
CD71+_EarlyErythroid107.65
CD8+_Tcells117.4
CardiacMyocytes180.15
Caudatenucleus112.25
Cerebellum108.9
CerebellumPeduncles198.7
CiliaryGanglion1778.85
CingulateCortex156.95
Colorectaladenocarcinoma81.75
DorsalRootGanglion2139.75
FetalThyroid391.7
Fetalbrain186.55
Fetalliver110.85
Fetallung182.55
GlobusPallidus241.45
Heart112.6
Hypothalamus149.05
Kidney107.6
Leukemia_chronicMyelogenousK-562159.9
Leukemia_promyelocytic-HL-60117.85
Leukemialymphoblastic(MOLT-4)138.9
Liver167.6
Lung106.45
Lymphnode161.65
Lymphoma_burkitts(Daudi)160.85
Lymphoma_burkitts(Raji)68.1
MedullaOblongata119.2
OccipitalLobe117.45
OlfactoryBulb169.65
Ovary595.7
Pancreas117.3
PancreaticIslet130.5
ParietalLobe135.3
Pituitary297.8
Placenta118.75
Pons169.85
PrefrontalCortex154
Prostate129.15
Salivarygland776.45
SkeletalMuscle337.75
Skin1627.9
SmoothMuscle219.25
Spinalcord135.25
SubthalamicNucleus187.85
SuperiorCervicalGanglion1114.35
TemporalLobe203.35
Testis115.2
TestisGermCell219.8
TestisIntersitial488.2
TestisLeydigCell927.95
TestisSeminiferousTubule746.5
Thalamus142.3
Thymus123.95
Thyroid155.55
Tongue720.45
Tonsil129.85
Trachea182.25
TrigeminalGanglion1421.95
Uterus58.5
UterusCorpus224.7
WholeBlood158.45
Wholebrain82.3
colon126.15
pineal_day87.28
pineal_night80.9
retina243.525
small_intestine120.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P64712
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.72 ± 0.79
Basal Forebrain3.56 ± 0.56
Basal Part of Pons3.54 ± 0.58
Cerebellar Cortex3.48 ± 0.53
Cerebellar Nuclei3.46 ± 0.42
Claustrum3.93 ± 0.65
Epithalamus4.66 ± 0.95
Frontal Lobe3.5 ± 0.65
Globus Pallidus3.1 ± 1.06
Hypothalamus3.69 ± 0.59
Insula3.53 ± 0.45
Limbic Lobe3.57 ± 0.7
Mesencephalon3.67 ± 0.56
Myelencephalon3.6 ± 0.68
Occipital Lobe3.9 ± 0.56
Parietal Lobe3.67 ± 0.62
Pontine Tegmentum3.63 ± 0.8
Striatum4.47 ± 0.52
Subthalamus3.24 ± 0.57
Temporal Lobe3.46 ± 0.62
Thalamus3.42 ± 0.61
White Matter2.21 ± 0.37
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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