AutismKB 2.0

Annotation Detail for ALG13


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Basic Information Top
Gene Symbol:ALG13 ( CXorf45,FLJ23018,FLJ31785,GLT28D1,MDS031,MGC12423,YGL047W )
Gene Full Name: asparagine-linked glycosylation 13 homolog (S. cerevisiae)
Band: Xq23
Quick LinksEntrez ID:79868; OMIM: 300776; Uniprot ID:ALG13_HUMAN; ENSEMBL ID: ENSG00000101901; HGNC ID: 30881
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst3 / 6231948
fetus23 / 56401240
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult95 / 193912148
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma20 / 174751144
breast (mammary gland) tumor6 / 9417863
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor27 / 119369226
germ cell tumor16 / 26384560
glioma6 / 10688356
head and neck tumor3 / 13630222
kidney tumor0 / 689590 
leukemia12 / 95842125
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma2 / 7175527
non-neoplasia2 / 9725020
normal150 / 336030744
ovarian tumor1 / 7668213
pancreatic tumor8 / 10461676
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer2 / 10268019
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites0 / 400150 
bladder20 / 29757672
blood8 / 12347864
bone0 / 716550 
bone marrow5 / 48801102
brain42 / 110098938
cervix0 / 481710 
connective tissue6 / 14925540
ear0 / 162120 
embryonic tissue9 / 21572241
esophagus1 / 2020949
eye1 / 2110544
heart7 / 8962678
intestine6 / 23447225
kidney14 / 21177766
larynx0 / 241450 
liver2 / 2077439
lung17 / 33697450
lymph0 / 442700 
lymph node11 / 91610120
mammary gland7 / 15327145
mouth2 / 6705229
muscle6 / 10771555
nerve0 / 157680 
ovary1 / 1020519
pancreas11 / 21481251
parathyroid2 / 2053997
pharynx3 / 4132872
pituitary gland1 / 1658560
placenta13 / 28082546
prostate6 / 18934531
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach30 / 96619310
testis27 / 33044281
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus11 / 23287847
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219015_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts31.7
Adipocyte8.35
AdrenalCortex10.75
Adrenalgland7.2
Amygdala8.6
Appendix11.1
AtrioventricularNode7.5
BDCA4+_DentriticCells31.5
Bonemarrow8.6
BronchialEpithelialCells8.35
CD105+_Endothelial11.9
CD14+_Monocytes14.45
CD19+_BCells(neg._sel.)38.35
CD33+_Myeloid35.6
CD34+12.15
CD4+_Tcells8.75
CD56+_NKCells13.45
CD71+_EarlyErythroid12.6
CD8+_Tcells7.95
CardiacMyocytes11.7
Caudatenucleus7.55
Cerebellum6.75
CerebellumPeduncles9.7
CiliaryGanglion6.65
CingulateCortex8.6
Colorectaladenocarcinoma12.75
DorsalRootGanglion6.7
FetalThyroid8.25
Fetalbrain8.35
Fetalliver8.65
Fetallung6.95
GlobusPallidus6.45
Heart11.45
Hypothalamus8.45
Kidney7.1
Leukemia_chronicMyelogenousK-5628.3
Leukemia_promyelocytic-HL-607.4
Leukemialymphoblastic(MOLT-4)6.45
Liver12.05
Lung9.05
Lymphnode7.15
Lymphoma_burkitts(Daudi)11.45
Lymphoma_burkitts(Raji)12.65
MedullaOblongata7.65
OccipitalLobe7.4
OlfactoryBulb6.5
Ovary5.75
Pancreas7.4
PancreaticIslet9.4
ParietalLobe9.05
Pituitary11.95
Placenta8.35
Pons8.3
PrefrontalCortex9.95
Prostate12.7
Salivarygland7.1
SkeletalMuscle13.15
Skin9.4
SmoothMuscle11.1
Spinalcord8.8
SubthalamicNucleus7.8
SuperiorCervicalGanglion12.4
TemporalLobe8.05
Testis7.15
TestisGermCell6.3
TestisIntersitial7.45
TestisLeydigCell8.5
TestisSeminiferousTubule7.1
Thalamus8.65
Thymus6.4
Thyroid12.1
Tongue9.45
Tonsil8.45
Trachea7.05
TrigeminalGanglion11.05
Uterus6.9
UterusCorpus7.8
WholeBlood9.1
Wholebrain7.1
colon8.75
pineal_day10.54
pineal_night11.5
retina10
small_intestine8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_7953_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.68 ± 0.58
Basal Forebrain6.69 ± 0.15
Basal Part of Pons6.4 ± 0.24
Cerebellar Cortex6.42 ± 0.2
Cerebellar Nuclei6.66 ± 0.19
Claustrum6.87 ± 0.26
Epithalamus6.45 ± 0.36
Frontal Lobe6.5 ± 0.3
Globus Pallidus7.03 ± 0.1
Hypothalamus6.63 ± 0.23
Insula6.48 ± 0.31
Limbic Lobe6.61 ± 0.3
Mesencephalon6.66 ± 0.32
Myelencephalon6.62 ± 0.35
Occipital Lobe6.75 ± 0.32
Parietal Lobe6.69 ± 0.3
Pontine Tegmentum6.65 ± 0.27
Striatum6.81 ± 0.28
Subthalamus6.52 ± 0.15
Temporal Lobe6.58 ± 0.31
Thalamus6.49 ± 0.3
White Matter7.51 ± 0.32
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00095305 19 74 92 ADLVISHAGAGSCLETLEK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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