Annotation Detail for MAGIX
Basic Information Top
| Gene Symbol: | MAGIX ( FLJ21687,JM10,MGC138889,PDZX ) |
|---|---|
| Gene Full Name: | MAGI family member, X-linked |
| Band: | Xp11.23 |
| Quick Links | Entrez ID:79917; OMIM: NA; Uniprot ID:MAGIX_HUMAN; ENSEMBL ID: ENSG00000017621; HGNC ID: 30006 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.193170
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 2 / 564012 | 3 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 21 / 1939121 | 10 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 7 / 106883 | 65 |  |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 28 / 3360307 | 8 | |
| ovarian tumor | 1 / 76682 | 13 |  |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 11 / 1100989 | 9 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 0 / 89626 | 0 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 4 / 20539 | 194 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_729_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.25 ± 0.71 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.07 ± 0.46 | |
| Basal Part of Pons | 3.67 ± 0.76 | |
| Cerebellar Cortex | 4.1 ± 0.59 | |
| Cerebellar Nuclei | 3.91 ± 0.89 | |
| Claustrum | 3.88 ± 0.58 | |
| Epithalamus | 3.86 ± 0.57 | |
| Frontal Lobe | 3.74 ± 0.66 | |
| Globus Pallidus | 4.61 ± 0.62 | |
| Hypothalamus | 3.71 ± 0.64 | |
| Insula | 3.74 ± 0.78 | |
| Limbic Lobe | 3.94 ± 0.62 | |
| Mesencephalon | 3.98 ± 0.71 | |
| Myelencephalon | 3.97 ± 0.67 | |
| Occipital Lobe | 3.88 ± 0.75 | |
| Parietal Lobe | 3.78 ± 0.66 | |
| Pontine Tegmentum | 3.8 ± 0.72 | |
| Striatum | 3.79 ± 0.71 | |
| Subthalamus | 3.81 ± 0.6 | |
| Temporal Lobe | 3.84 ± 0.67 | |
| Thalamus | 3.8 ± 0.64 | |
| White Matter | 3.74 ± 0.44 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Pdzx | CB | Cerebellum | 4.98 | |
| 6.36 | | |||
| Pdzx | CTX | Cerebral cortex | 5.21 | |
| 4.62 | | |||
| Pdzx | HIP | Hippocampal region | 1.83 | |
| 2.25 | | |||
| Pdzx | HPF | Hippocampal formation | 1.91 | |
| 1.97 | | |||
| Pdzx | HY | Hypothalamus | 0.4 | |
| 0.41 | | |||
| Pdzx | LSX | Lateral septal complex | 1.18 | |
| 0.99 | | |||
| Pdzx | MB | Midbrain | 0.86 | |
| 1.43 | | |||
| Pdzx | MY | Medulla | 10.62 | |
| 14.99 | | |||
| Pdzx | OLF | Olfactory bulb | 8.79 | |
| 8.49 | | |||
| Pdzx | P | Pons | 1.55 | |
| 2.13 | | |||
| Pdzx | PAL | Pallidum | 0.75 | |
| 0.73 | | |||
| Pdzx | RHP | Retrohippocampal region | 2.11 | |
| 1.65 | | |||
| Pdzx | sAMY | Striatum-like amygdalar nuclei | 0.71 | |
| 0.97 | | |||
| Pdzx | STR | Striatum | 0.91 | |
| 0.78 | | |||
| Pdzx | STRd | Striatum dorsal region | 0.3 | |
| 0.26 | | |||
| Pdzx | STRv | Striatum ventral region | 3.22 | |
| 2.34 | | |||
| Pdzx | TH | Thalamus | 1.22 | |
| 1.37 | |