AutismKB 2.0

Annotation Detail for ATF7IP2


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Basic Information Top
Gene Symbol:ATF7IP2 ( FLJ12668,MCAF2 )
Gene Full Name: activating transcription factor 7 interacting protein 2
Band: 16p13.2-p13.13
Quick LinksEntrez ID:80063; OMIM: NA; Uniprot ID:MCAF2_HUMAN; ENSEMBL ID: ENSG00000166669; HGNC ID: 20397
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst3 / 6231948
fetus5 / 5640128
neonate1 / 3109732
infant0 / 236200 
juvenile0 / 555560 
adult30 / 193912115
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor14 / 26384553
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor2 / 9635920
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia1 / 9725010
normal69 / 336030720
ovarian tumor1 / 7668213
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood3 / 12347824
bone0 / 716550 
bone marrow1 / 4880120
brain9 / 11009898
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye2 / 2110549
heart0 / 896260 
intestine2 / 2344728
kidney5 / 21177723
larynx0 / 241450 
liver8 / 20774338
lung0 / 3369740 
lymph0 / 442700 
lymph node2 / 9161021
mammary gland1 / 1532716
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary1 / 1020519
pancreas4 / 21481218
parathyroid1 / 2053948
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta4 / 28082514
prostate2 / 18934510
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach5 / 9661951
testis49 / 330442148
thymus3 / 8113136
thyroid1 / 4747321
tonsil1 / 1699958
trachea2 / 5241338
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219870_at
Cell line Expression level Expression bar
721_B_lymphoblasts17.1
Adipocyte9.45
AdrenalCortex13.35
Adrenalgland9.25
Amygdala9.75
Appendix28.35
AtrioventricularNode47.35
BDCA4+_DentriticCells12.45
Bonemarrow12.05
BronchialEpithelialCells6.65
CD105+_Endothelial20
CD14+_Monocytes9.45
CD19+_BCells(neg._sel.)22
CD33+_Myeloid11.95
CD34+27.3
CD4+_Tcells94.6
CD56+_NKCells37.55
CD71+_EarlyErythroid14.3
CD8+_Tcells88.85
CardiacMyocytes12.65
Caudatenucleus11.55
Cerebellum9.45
CerebellumPeduncles12.8
CiliaryGanglion13.45
CingulateCortex18.75
Colorectaladenocarcinoma8.2
DorsalRootGanglion41.25
FetalThyroid11.85
Fetalbrain11.25
Fetalliver11.35
Fetallung8.25
GlobusPallidus20.6
Heart15.15
Hypothalamus11.85
Kidney16.95
Leukemia_chronicMyelogenousK-56246.95
Leukemia_promyelocytic-HL-608.85
Leukemialymphoblastic(MOLT-4)13.25
Liver13.7
Lung8.7
Lymphnode22.1
Lymphoma_burkitts(Daudi)14.55
Lymphoma_burkitts(Raji)10.3
MedullaOblongata13.1
OccipitalLobe9.5
OlfactoryBulb9.05
Ovary9
Pancreas13.5
PancreaticIslet13.75
ParietalLobe13.7
Pituitary15.15
Placenta9.75
Pons23.65
PrefrontalCortex19.45
Prostate11.5
Salivarygland12.2
SkeletalMuscle33.1
Skin17.45
SmoothMuscle10.15
Spinalcord10.7
SubthalamicNucleus11.15
SuperiorCervicalGanglion33.2
TemporalLobe10.8
Testis20.7
TestisGermCell90.65
TestisIntersitial45
TestisLeydigCell40.6
TestisSeminiferousTubule59.7
Thalamus15.8
Thymus11.15
Thyroid11.2
Tongue17.75
Tonsil39.35
Trachea10.85
TrigeminalGanglion17.95
Uterus8.2
UterusCorpus16.6
WholeBlood15.75
Wholebrain8.25
colon10.15
pineal_day29.52
pineal_night39.18
retina13.45
small_intestine8.35
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P341987
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.22 ± 0.49
Basal Forebrain5.86 ± 0.26
Basal Part of Pons5.66 ± 0.48
Cerebellar Cortex5.76 ± 0.41
Cerebellar Nuclei5.63 ± 0.43
Claustrum5.59 ± 0.53
Epithalamus6.14 ± 0.46
Frontal Lobe6.05 ± 0.41
Globus Pallidus5.72 ± 0.55
Hypothalamus6.08 ± 0.43
Insula6.2 ± 0.43
Limbic Lobe6.12 ± 0.45
Mesencephalon6.06 ± 0.36
Myelencephalon5.92 ± 0.45
Occipital Lobe5.87 ± 0.41
Parietal Lobe6.09 ± 0.46
Pontine Tegmentum6.02 ± 0.45
Striatum5.89 ± 0.45
Subthalamus5.79 ± 0.3
Temporal Lobe6.18 ± 0.38
Thalamus5.86 ± 0.43
White Matter5.05 ± 0.14
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Atf7ip2CBCerebellum0.87
1.23
Atf7ip2CTXCerebral cortex1.34
1.53
Atf7ip2HIPHippocampal region0.51
0.62
Atf7ip2HPFHippocampal formation0.53
0.61
Atf7ip2HYHypothalamus0.04
0.06
Atf7ip2LSXLateral septal complex0.35
0.39
Atf7ip2MBMidbrain0.37
0.53
Atf7ip2MYMedulla0.49
0.7
Atf7ip2OLFOlfactory bulb2.38
1.96
Atf7ip2PPons0.37
0.54
Atf7ip2PALPallidum0.16
0.15
Atf7ip2RHPRetrohippocampal region0.59
0.63
Atf7ip2sAMYStriatum-like amygdalar nuclei0.15
0.25
Atf7ip2STRStriatum0.41
0.42
Atf7ip2STRdStriatum dorsal region0.45
0.45
Atf7ip2STRvStriatum ventral region0.44
0.41
Atf7ip2THThalamus0.68
0.72
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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