AutismKB 2.0

Annotation Detail for CENPT


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:CENPT ( C16orf56,CENP-T,FLJ13111,FLJ43376 )
Gene Full Name: centromere protein T
Band: 16q22.1
Quick LinksEntrez ID:80152; OMIM: 611510; Uniprot ID:CENPT_HUMAN; ENSEMBL ID: ENSG00000102901; HGNC ID: 25787
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst11 / 62319176
fetus67 / 564012118
neonate3 / 3109796
infant1 / 2362042
juvenile1 / 5555617
adult190 / 193912197
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma2 / 17475114
breast (mammary gland) tumor8 / 9417884
cervical tumor1 / 3436629
chondrosarcoma6 / 8282372
colorectal tumor2 / 11424617
esophageal tumor6 / 17290347
gastrointestinal tumor3 / 11936925
germ cell tumor15 / 26384556
glioma9 / 10688384
head and neck tumor7 / 13630251
kidney tumor5 / 6895972
leukemia13 / 95842135
liver tumor5 / 9635951
lung tumor11 / 103127106
lymphoma7 / 7175597
non-neoplasia8 / 9725082
normal523 / 3360307155
ovarian tumor12 / 76682156
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS17 / 125680135
prostate cancer5 / 10268048
retinoblastoma4 / 4635686
skin tumor4 / 12494932
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor12 / 90257132
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland8 / 33197240
ascites2 / 4001549
bladder5 / 29757168
blood13 / 123478105
bone8 / 71655111
bone marrow8 / 48801163
brain185 / 1100989168
cervix7 / 48171145
connective tissue10 / 14925566
ear0 / 162120 
embryonic tissue22 / 215722101
esophagus6 / 20209296
eye12 / 21105456
heart9 / 89626100
intestine18 / 23447276
kidney24 / 211777113
larynx0 / 241450 
liver8 / 20774338
lung26 / 33697477
lymph0 / 442700 
lymph node8 / 9161087
mammary gland8 / 15327152
mouth7 / 67052104
muscle5 / 10771546
nerve4 / 15768253
ovary15 / 102051146
pancreas7 / 21481232
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta42 / 280825149
prostate12 / 18934563
salivary gland3 / 20155148
skin7 / 21057433
spleen26 / 53952481
stomach10 / 96619103
testis93 / 330442281
thymus58 / 81131714
thyroid3 / 4747363
tonsil0 / 169990 
trachea4 / 5241376
umbilical cord1 / 1368073
uterus44 / 232878188
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218148_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.2
Adipocyte3.7
AdrenalCortex3.85
Adrenalgland3.15
Amygdala4
Appendix3.75
AtrioventricularNode2.8
BDCA4+_DentriticCells4.3
Bonemarrow3.65
BronchialEpithelialCells3.65
CD105+_Endothelial3.85
CD14+_Monocytes4.05
CD19+_BCells(neg._sel.)6.65
CD33+_Myeloid5.2
CD34+7
CD4+_Tcells7.35
CD56+_NKCells4.55
CD71+_EarlyErythroid17.6
CD8+_Tcells10.9
CardiacMyocytes4.65
Caudatenucleus3.35
Cerebellum3.05
CerebellumPeduncles4.2
CiliaryGanglion2.6
CingulateCortex3.95
Colorectaladenocarcinoma3.75
DorsalRootGanglion2.85
FetalThyroid3.75
Fetalbrain3.8
Fetalliver3.2
Fetallung3.15
GlobusPallidus2.7
Heart4.85
Hypothalamus4.1
Kidney3
Leukemia_chronicMyelogenousK-5623.6
Leukemia_promyelocytic-HL-603.35
Leukemialymphoblastic(MOLT-4)3.95
Liver4.85
Lung4.15
Lymphnode3.3
Lymphoma_burkitts(Daudi)4.8
Lymphoma_burkitts(Raji)5.25
MedullaOblongata3.45
OccipitalLobe3.35
OlfactoryBulb3
Ovary2.45
Pancreas3
PancreaticIslet3.95
ParietalLobe3.9
Pituitary4.35
Placenta3.9
Pons3.55
PrefrontalCortex4.8
Prostate4.4
Salivarygland3
SkeletalMuscle4.2
Skin2.9
SmoothMuscle4.25
Spinalcord4.05
SubthalamicNucleus3.4
SuperiorCervicalGanglion4.15
TemporalLobe3.4
Testis3.6
TestisGermCell7.75
TestisIntersitial3.4
TestisLeydigCell4.5
TestisSeminiferousTubule3.85
Thalamus3.8
Thymus3.05
Thyroid4.8
Tongue3.6
Tonsil3.7
Trachea3.15
TrigeminalGanglion3.7
Uterus3.1
UterusCorpus3.3
WholeBlood4.15
Wholebrain3.2
colon3.75
pineal_day4.8
pineal_night4.62
retina4.575
small_intestine3.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P163580
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.35 ± 0.47
Basal Forebrain7.95 ± 0.46
Basal Part of Pons7.65 ± 0.42
Cerebellar Cortex8.06 ± 0.38
Cerebellar Nuclei7.45 ± 0.36
Claustrum8.7 ± 0.56
Epithalamus7.2 ± 0.41
Frontal Lobe7.55 ± 0.54
Globus Pallidus7.8 ± 0.3
Hypothalamus7.42 ± 0.55
Insula7.76 ± 0.64
Limbic Lobe8.13 ± 0.57
Mesencephalon7.67 ± 0.5
Myelencephalon7.82 ± 0.49
Occipital Lobe8.16 ± 0.53
Parietal Lobe7.84 ± 0.56
Pontine Tegmentum7.77 ± 0.58
Striatum7.69 ± 0.51
Subthalamus7.12 ± 0.3
Temporal Lobe7.81 ± 0.49
Thalamus7.63 ± 0.38
White Matter7.9 ± 0.51
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CENPT_HUMAN_188 22 188 209 SLNLTFATPLQPQSVQRPGLAR PRIDE
PAp00504113 37 358 394 VEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved