Annotation Detail for ALPK1
Basic Information Top
| Gene Symbol: | ALPK1 ( 8430410J10Rik,FLJ22670,KIAA1527,LAK ) |
|---|---|
| Gene Full Name: | alpha-kinase 1 |
| Band: | 4q25 |
| Quick Links | Entrez ID:80216; OMIM: 607347; Uniprot ID:ALPK1_HUMAN; ENSEMBL ID: ENSG00000073331; HGNC ID: 20917 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.652825
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 11 / 564012 | 19 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 44 / 1939121 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 1 / 106883 | 9 |  |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 68 / 3360307 | 20 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 7 / 123478 | 56 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 13 / 1100989 | 11 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 9 / 234472 | 38 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 7 / 207743 | 33 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 9 / 91610 | 98 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 5 / 96619 | 51 | |
| testis | 1 / 330442 | 3 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P133133
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.6 ± 0.95 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.32 ± 0.42 | |
| Basal Part of Pons | 3.47 ± 0.72 | |
| Cerebellar Cortex | 2.46 ± 0.4 | |
| Cerebellar Nuclei | 3.13 ± 0.53 | |
| Claustrum | 2.83 ± 0.89 | |
| Epithalamus | 3.34 ± 0.81 | |
| Frontal Lobe | 3.2 ± 0.91 | |
| Globus Pallidus | 3.8 ± 0.89 | |
| Hypothalamus | 2.24 ± 0.56 | |
| Insula | 3.06 ± 0.94 | |
| Limbic Lobe | 4.1 ± 1.27 | |
| Mesencephalon | 2.97 ± 0.74 | |
| Myelencephalon | 3.23 ± 0.88 | |
| Occipital Lobe | 3.1 ± 0.91 | |
| Parietal Lobe | 3.33 ± 0.98 | |
| Pontine Tegmentum | 3.13 ± 0.83 | |
| Striatum | 5.45 ± 0.98 | |
| Subthalamus | 2.87 ± 0.62 | |
| Temporal Lobe | 3.06 ± 0.91 | |
| Thalamus | 2.65 ± 0.72 | |
| White Matter | 2.4 ± 0.35 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Alpk1 | CB | Cerebellum | 1.24 | |
| 1.52 | | |||
| Alpk1 | CTX | Cerebral cortex | 0.93 | |
| 1.36 | | |||
| Alpk1 | HIP | Hippocampal region | 1.37 | |
| 1.44 | | |||
| Alpk1 | HPF | Hippocampal formation | 0.95 | |
| 0.94 | | |||
| Alpk1 | HY | Hypothalamus | 1.6 | |
| 2.62 | | |||
| Alpk1 | LSX | Lateral septal complex | 0.14 | |
| 0.28 | | |||
| Alpk1 | MB | Midbrain | 0.49 | |
| 0.88 | | |||
| Alpk1 | MY | Medulla | 4.69 | |
| 6.86 | | |||
| Alpk1 | OLF | Olfactory bulb | 1.14 | |
| 2.15 | | |||
| Alpk1 | P | Pons | 0.15 | |
| 0.29 | | |||
| Alpk1 | PAL | Pallidum | 0.33 | |
| 0.73 | | |||
| Alpk1 | RHP | Retrohippocampal region | 0.23 | |
| 0.24 | | |||
| Alpk1 | sAMY | Striatum-like amygdalar nuclei | 1.25 | |
| 1.39 | | |||
| Alpk1 | STR | Striatum | 0.36 | |
| 0.49 | | |||
| Alpk1 | STRd | Striatum dorsal region | 0.34 | |
| 0.52 | | |||
| Alpk1 | STRv | Striatum ventral region | 0.08 | |
| 0.07 | | |||
| Alpk1 | TH | Thalamus | 1.06 | |
| 1.89 | |