Annotation Detail for ABTB1
Basic Information Top
| Gene Symbol: | ABTB1 ( BPOZ,BTB3,EF1ABP,MGC20585 ) |
|---|---|
| Gene Full Name: | ankyrin repeat and BTB (POZ) domain containing 1 |
| Band: | 3q21.3 |
| Quick Links | Entrez ID:80325; OMIM: 608308; Uniprot ID:ABTB1_HUMAN; ENSEMBL ID: ENSG00000114626; HGNC ID: 18275 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.107812
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 26 / 564012 | 46 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 131 / 1939121 | 67 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 17 / 95842 | 177 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 194 / 3360307 | 57 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 7 / 104616 | 66 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 15 / 123478 | 121 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 37 / 1100989 | 33 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 18 / 211054 | 85 | |
| heart | 6 / 89626 | 66 | |
| intestine | 15 / 234472 | 63 | |
| kidney | 28 / 211777 | 132 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 22 / 336974 | 65 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 13 / 91610 | 141 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 23 / 214812 | 107 | |
| parathyroid | 4 / 20539 | 194 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 3 / 16585 | 180 | |
| placenta | 15 / 280825 | 53 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 2 / 96619 | 20 | |
| testis | 3 / 330442 | 9 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P200297
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.29 ± 0.86 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.42 ± 0.57 | |
| Basal Part of Pons | 5.28 ± 0.68 | |
| Cerebellar Cortex | 5.23 ± 0.54 | |
| Cerebellar Nuclei | 4.22 ± 0.57 | |
| Claustrum | 3.64 ± 0.9 | |
| Epithalamus | 4.32 ± 0.92 | |
| Frontal Lobe | 4.84 ± 0.72 | |
| Globus Pallidus | 3.25 ± 0.32 | |
| Hypothalamus | 4.42 ± 0.6 | |
| Insula | 4.61 ± 0.53 | |
| Limbic Lobe | 4.21 ± 0.88 | |
| Mesencephalon | 4.3 ± 0.89 | |
| Myelencephalon | 4.48 ± 0.73 | |
| Occipital Lobe | 3.94 ± 0.88 | |
| Parietal Lobe | 4.6 ± 0.75 | |
| Pontine Tegmentum | 4.35 ± 0.74 | |
| Striatum | 3.66 ± 0.71 | |
| Subthalamus | 4 ± 0.75 | |
| Temporal Lobe | 4.63 ± 0.68 | |
| Thalamus | 4.53 ± 0.65 | |
| White Matter | 4.08 ± 0.55 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Abtb1 | CB | Cerebellum | 41.94 | |
| 30.9 | | |||
| Abtb1 | CTX | Cerebral cortex | 31.8 | |
| 21.56 | | |||
| Abtb1 | HIP | Hippocampal region | 50.42 | |
| 28.08 | | |||
| Abtb1 | HPF | Hippocampal formation | 50.02 | |
| 31.76 | | |||
| Abtb1 | HY | Hypothalamus | 14.83 | |
| 9.6 | | |||
| Abtb1 | LSX | Lateral septal complex | 2.8 | |
| 1.61 | | |||
| Abtb1 | MB | Midbrain | 11.28 | |
| 8.08 | | |||
| Abtb1 | MY | Medulla | 37.09 | |
| 28.77 | | |||
| Abtb1 | OLF | Olfactory bulb | 55.74 | |
| 35.47 | | |||
| Abtb1 | P | Pons | 30.44 | |
| 21.9 | | |||
| Abtb1 | PAL | Pallidum | 11.4 | |
| 7.81 | | |||
| Abtb1 | RHP | Retrohippocampal region | 49.1 | |
| 36.16 | | |||
| Abtb1 | sAMY | Striatum-like amygdalar nuclei | 23.91 | |
| 14.22 | | |||
| Abtb1 | STR | Striatum | 12.35 | |
| 7.07 | | |||
| Abtb1 | STRd | Striatum dorsal region | 6.88 | |
| 4.02 | | |||
| Abtb1 | STRv | Striatum ventral region | 30.32 | |
| 15.58 | | |||
| Abtb1 | TH | Thalamus | 10.06 | |
| 6.19 | |