AutismKB 2.0

Annotation Detail for DNAJC5


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:DNAJC5 ( CSP,DKFZp434N1429,DKFZp761N1221,DNAJC5A,FLJ00118,FLJ13070 )
Gene Full Name: DnaJ (Hsp40) homolog, subfamily C, member 5
Band: 20q13.33
Quick LinksEntrez ID:80331; OMIM: 611203; Uniprot ID:DNJC5_HUMAN; ENSEMBL ID: ENSG00000101152; HGNC ID: 16235
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst5 / 6231980
fetus18 / 56401231
neonate0 / 310970 
infant0 / 236200 
juvenile2 / 5555635
adult158 / 193912181
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor7 / 9417874
cervical tumor1 / 3436629
chondrosarcoma12 / 82823144
colorectal tumor18 / 114246157
esophageal tumor0 / 172900 
gastrointestinal tumor10 / 11936983
germ cell tumor10 / 26384537
glioma13 / 106883121
head and neck tumor3 / 13630222
kidney tumor3 / 6895943
leukemia19 / 95842198
liver tumor8 / 9635983
lung tumor12 / 103127116
lymphoma7 / 7175597
non-neoplasia11 / 97250113
normal223 / 336030766
ovarian tumor8 / 76682104
pancreatic tumor8 / 10461676
primitive neuroectodermal tumor of the CNS17 / 125680135
prostate cancer12 / 102680116
retinoblastoma4 / 4635686
skin tumor18 / 124949144
soft tissue/muscle tissue tumor15 / 125191119
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder1 / 2975733
blood10 / 12347880
bone5 / 7165569
bone marrow0 / 488010 
brain71 / 110098964
cervix1 / 4817120
connective tissue8 / 14925553
ear0 / 162120 
embryonic tissue11 / 21572250
esophagus0 / 202090 
eye30 / 211054142
heart3 / 8962633
intestine29 / 234472123
kidney4 / 21177718
larynx2 / 2414582
liver8 / 20774338
lung36 / 336974106
lymph4 / 4427090
lymph node11 / 91610120
mammary gland18 / 153271117
mouth0 / 670520 
muscle12 / 107715111
nerve1 / 1576863
ovary9 / 10205188
pancreas16 / 21481274
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta5 / 28082517
prostate17 / 18934589
salivary gland0 / 201550 
skin18 / 21057485
spleen3 / 5395255
stomach9 / 9661993
testis10 / 33044230
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus13 / 23287855
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: Primary tumors (U95A)
  • Affymatrix Probe ID: 35728_at
Cell line Expression level Expression bar
Pr1T2.609
Pr4T3.005
Pr5T2.752
Pr7T2.906
Pr1N2.95
Pr5N2.888
Pr6T3.299
Pr3N2.876
Pr3T2.97
Pr4N2.876
Pr2N2.815
Pr8N2.899
Pr8T3.038
Pr9N2.866
Pr10N2.897
Pr10T2.995
Pr9T2.823
Pr11T2.99
Pr12T2.922
Pr13AT2.983
Pr13BT2.952
Pr21T2.912
Pr22T2.998
Pr30T3.187
Pr23T3.146
Pr19T3.035
Pr26T2.922
Pr31T2.978
Pr16T2.978
Pr17T2.976
Pr24T2.825
Pr27T2.837
Pr29T2.656
OVR1022.992
HUOVR2.881
G23.208
G33.085
G52.929
G63.011
G82.865
G92.953
CO7T3.052
CO8T2.844
CO15T3.165
CO27T3.085
CO30T3.193
CO32T2.993
CO40T2.953
CO52N3.391
CO62N3.202
K12.872
K22.86
K32.71
K42.927
K14N3.401
K163.012
K173.369
K192.988
K202.984
K222.989
CO9T2.935
CO20T3.179
CO24T3.07
CO36N3.192
K182.955
P1N2.812
P2N3.049
P5N3.166
P82.93
P112.543
P173.058
K213.051
K25N3.192
K28N3.237
CO42T3.083
P222.764
P13N2.891
LU11T2.984
LU16T3.092
LU7T2.872
LU8T2.887
LU12T3.007
LU13T2.995
LU5T3.066
LU6T3.172
LU14T3.076
LU17T3.118
LU50N2.765
LU52N3.079
LU18T2.985
LU55N2.971
LU3N3.199
P16B3.314
P232.769
OVR162.875
OVR192.851
OVR272.92
OVR282.799
OVR278E3.054
OVR22.968
OVR52.797
OVR83.064
OVR113.02
OVR123.03
OVR132.894
OVR223.016
OVR262.975
OVR103.122
OVR278S3.145
OVR12.974
LU19T2.964
LU20T2.994
LU24T3.013
LU25T3.039
LU31T3.327
LU34T3.09
LU39T2.695
CO14T3.105
CO21T3.348
CO23T3.119
CO41N2.949
LU40T3.228
LU41T2.817
LU44T3.097
LU46T3.053
LU49T3.064
L5N3.086
LU42T3.053
LU30T3.088
LU43T3.384
CO5T3.018
CO44T2.921
CO49T3.086
CO51T3.1
CO56T2.952
CO61T2.941
LU26T3.09
LU33T3.293
LU36T2.95
CO43T3.164
G183.244
G463.015
L11T3.31
L13N3.128
L30T3.201
L31T3.157
L32T3.384
L34T3.337
L35T3.262
B1N3.306
B5N2.987
B8T3.001
B10T2.94
B14T3.219
B16T3.008
B17T3.003
B1NR3.183
B20T3.378
B51NR3.108
B6T3.373
B15T3.44
B21T3.734
B29T3.094
B31T3.314
B32T3.32
B24T2.964
B46T2.864
B34T2.976
B36T3.041
B37T3.155
B38T3.041
B39T2.857
X1023.04
X116_023.115
G2802.88
X462.928
X582.926
G1863.144
G2963.026
L38T3.068
L31T.22.952
L26N3.152
N257ANTR3.052
N285BODY3.013
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_13964_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.22 ± 0.3
Basal Forebrain8.69 ± 0.16
Basal Part of Pons8.98 ± 0.34
Cerebellar Cortex8.67 ± 0.3
Cerebellar Nuclei8.61 ± 0.3
Claustrum9.29 ± 0.54
Epithalamus8.12 ± 0.45
Frontal Lobe8.77 ± 0.36
Globus Pallidus8.35 ± 0.26
Hypothalamus8.76 ± 0.48
Insula8.76 ± 0.32
Limbic Lobe9.13 ± 0.37
Mesencephalon8.83 ± 0.47
Myelencephalon8.86 ± 0.37
Occipital Lobe9.24 ± 0.39
Parietal Lobe8.98 ± 0.33
Pontine Tegmentum8.85 ± 0.29
Striatum9.04 ± 0.3
Subthalamus8.75 ± 0.06
Temporal Lobe8.87 ± 0.32
Thalamus8.88 ± 0.29
White Matter7.75 ± 0.55
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Dnajc5CBCerebellum100
100
Dnajc5CTXCerebral cortex100
100
Dnajc5HIPHippocampal region100
100
Dnajc5HPFHippocampal formation100
100
Dnajc5HYHypothalamus100
100
Dnajc5LSXLateral septal complex100
100
Dnajc5MBMidbrain100
100
Dnajc5MYMedulla100
100
Dnajc5OLFOlfactory bulb100
100
Dnajc5PPons100
100
Dnajc5PALPallidum100
100
Dnajc5RHPRetrohippocampal region100
100
Dnajc5sAMYStriatum-like amygdalar nuclei100
100
Dnajc5STRStriatum100
100
Dnajc5STRdStriatum dorsal region100
100
Dnajc5STRvStriatum ventral region100
100
Dnajc5THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
DNJC5_HUMAN_41 17 41 57 YHPDKNPDNPEAADKFK PRIDE
PAp00132383 17 8 24 SLSTSGESLYHVLGLDK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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