AutismKB 2.0

Annotation Detail for TSGA10


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Basic Information Top
Gene Symbol:TSGA10 ( CEP4L,CT79 )
Gene Full Name: testis specific, 10
Band: 2q11.2
Quick LinksEntrez ID:80705; OMIM: 607166; Uniprot ID:TSG10_HUMAN; ENSEMBL ID: ENSG00000135951; HGNC ID: 14927
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus10 / 56401217
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult18 / 19391219
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor1 / 2638453
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal60 / 336030717
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood0 / 1234780 
bone0 / 716550 
bone marrow1 / 4880120
brain11 / 11009899
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye1 / 2110544
heart0 / 896260 
intestine0 / 2344720 
kidney3 / 21177714
larynx0 / 241450 
liver0 / 2077430 
lung4 / 33697411
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth0 / 670520 
muscle3 / 10771527
nerve0 / 157680 
ovary0 / 1020510 
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate1 / 1893455
salivary gland0 / 201550 
skin1 / 2105744
spleen0 / 539520 
stomach1 / 9661910
testis71 / 330442214
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220623_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.75
Adipocyte7.05
AdrenalCortex8.3
Adrenalgland6.3
Amygdala7.4
Appendix8.1
AtrioventricularNode6.05
BDCA4+_DentriticCells6.9
Bonemarrow7.45
BronchialEpithelialCells7.05
CD105+_Endothelial7.45
CD14+_Monocytes7.75
CD19+_BCells(neg._sel.)7.55
CD33+_Myeloid9.05
CD34+8.65
CD4+_Tcells7.75
CD56+_NKCells8.15
CD71+_EarlyErythroid6.9
CD8+_Tcells7.05
CardiacMyocytes10.1
Caudatenucleus6.6
Cerebellum5.9
CerebellumPeduncles8.65
CiliaryGanglion10.95
CingulateCortex7.55
Colorectaladenocarcinoma7.35
DorsalRootGanglion10.55
FetalThyroid7.1
Fetalbrain7.1
Fetalliver6.45
Fetallung5.6
GlobusPallidus5.65
Heart10.35
Hypothalamus8
Kidney6.1
Leukemia_chronicMyelogenousK-5626.55
Leukemia_promyelocytic-HL-606.45
Leukemialymphoblastic(MOLT-4)5.8
Liver10.85
Lung7.95
Lymphnode6.3
Lymphoma_burkitts(Daudi)9.8
Lymphoma_burkitts(Raji)11.4
MedullaOblongata6.65
OccipitalLobe6.55
OlfactoryBulb5.75
Ovary5.8
Pancreas5.95
PancreaticIslet7.85
ParietalLobe7.95
Pituitary8.45
Placenta7.4
Pons8
PrefrontalCortex8.65
Prostate8.7
Salivarygland5.85
SkeletalMuscle8.9
Skin6.85
SmoothMuscle8.35
Spinalcord7.75
SubthalamicNucleus7.1
SuperiorCervicalGanglion9.8
TemporalLobe6.75
Testis6.25
TestisGermCell112.1
TestisIntersitial339.05
TestisLeydigCell80.9
TestisSeminiferousTubule27.45
Thalamus7.55
Thymus5.65
Thyroid9.3
Tongue7.35
Tonsil7.3
Trachea6.1
TrigeminalGanglion9.5
Uterus6
UterusCorpus6.8
WholeBlood7.9
Wholebrain6.15
colon7.35
pineal_day8.98
pineal_night8.66
retina8.85
small_intestine6.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5604_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.09 ± 0.48
Basal Forebrain4.21 ± 0.35
Basal Part of Pons3.94 ± 1.03
Cerebellar Cortex3.25 ± 0.48
Cerebellar Nuclei3.92 ± 0.55
Claustrum3.85 ± 0.96
Epithalamus6 ± 1.08
Frontal Lobe3.76 ± 0.85
Globus Pallidus5.39 ± 0.31
Hypothalamus3.27 ± 0.39
Insula3.91 ± 0.68
Limbic Lobe4.31 ± 0.7
Mesencephalon4.16 ± 0.74
Myelencephalon3.96 ± 0.9
Occipital Lobe4.08 ± 0.73
Parietal Lobe3.85 ± 0.87
Pontine Tegmentum3.72 ± 0.68
Striatum4.41 ± 0.7
Subthalamus3.89 ± 0.43
Temporal Lobe3.8 ± 0.8
Thalamus3.6 ± 0.56
White Matter6.7 ± 0.57
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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