Annotation Detail for AKNA
Basic Information Top
| Gene Symbol: | AKNA ( FLJ31001,FLJ33184,KIAA1968,RP11-82I1.4 ) |
|---|---|
| Gene Full Name: | AT-hook transcription factor |
| Band: | 9q32 |
| Quick Links | Entrez ID:80709; OMIM: 605729; Uniprot ID:AKNA_HUMAN; ENSEMBL ID: ENSG00000106948; HGNC ID: 24108 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.494895
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 16 / 564012 | 28 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 70 / 1939121 | 36 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 2 / 17475 | 114 |  |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 27 / 95842 | 281 |  |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 6 / 71755 | 83 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 100 / 3360307 | 29 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 3 / 13106 | 228 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 0 / 29757 | 0 | |
| blood | 13 / 123478 | 105 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 7 / 48801 | 143 | |
| brain | 13 / 1100989 | 11 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 14 / 211054 | 66 | |
| heart | 3 / 89626 | 33 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 8 / 336974 | 23 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 47 / 91610 | 513 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 0 / 96619 | 0 | |
| testis | 3 / 330442 | 9 | |
| thymus | 5 / 81131 | 61 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 0 / 51780 | 0 |
- Probe name: CUST_465_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.98 ± 1.16 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.24 ± 0.3 | |
| Basal Part of Pons | 2.03 ± 0.61 | |
| Cerebellar Cortex | 1.92 ± 0.59 | |
| Cerebellar Nuclei | 2.54 ± 0.62 | |
| Claustrum | 2.72 ± 0.74 | |
| Epithalamus | 2.84 ± 0.51 | |
| Frontal Lobe | 2.19 ± 0.78 | |
| Globus Pallidus | 3.93 ± 1.22 | |
| Hypothalamus | 2.19 ± 0.74 | |
| Insula | 2.04 ± 0.77 | |
| Limbic Lobe | 2.35 ± 0.73 | |
| Mesencephalon | 2.47 ± 0.86 | |
| Myelencephalon | 2.47 ± 0.81 | |
| Occipital Lobe | 2.14 ± 0.86 | |
| Parietal Lobe | 2.49 ± 0.88 | |
| Pontine Tegmentum | 2.38 ± 0.77 | |
| Striatum | 2.88 ± 0.79 | |
| Subthalamus | 2.15 ± 0.67 | |
| Temporal Lobe | 2.36 ± 0.77 | |
| Thalamus | 2.26 ± 0.8 | |
| White Matter | 3.13 ± 0.76 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00039378 | 16 | 1071 | 1086 | AGRDQAICELQEEVSR | Peptide Atlas |