Annotation Detail for EEPD1
Basic Information Top
| Gene Symbol: | EEPD1 ( HSPC107,KIAA1706 ) |
|---|---|
| Gene Full Name: | endonuclease/exonuclease/phosphatase family domain containing 1 |
| Band: | 7p14.2 |
| Quick Links | Entrez ID:80820; OMIM: NA; Uniprot ID:EEPD1_HUMAN; ENSEMBL ID: ENSG00000122547; HGNC ID: 22223 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.670591
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 28 / 564012 | 49 | |
| neonate | 1 / 31097 | 32 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 61 / 1939121 | 31 | |
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 2 / 564012 | 3 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 1 / 1939121 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 10 / 82823 | 120 | |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 17 / 119369 | 142 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 8 / 136302 | 58 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 9 / 97250 | 92 | |
| normal | 103 / 3360307 | 30 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 7 / 104616 | 66 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 3 / 90257 | 33 | |
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 4 / 3360307 | 1 |  |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 1 / 29757 | 33 | |
| blood | 3 / 123478 | 24 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 43 / 1100989 | 39 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 5 / 89626 | 55 | |
| intestine | 12 / 234472 | 51 | |
| kidney | 11 / 211777 | 51 | |
| larynx | 2 / 24145 | 82 | |
| liver | 2 / 207743 | 9 | |
| lung | 6 / 336974 | 17 | |
| lymph | 4 / 44270 | 90 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 14 / 153271 | 91 | |
| mouth | 5 / 67052 | 74 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 1 / 210574 | 4 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 15 / 96619 | 155 | |
| testis | 7 / 330442 | 21 | |
| thymus | 7 / 81131 | 86 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 0 / 51780 | 0 | |
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 0 / 1100989 | 0 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_4666_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.01 ± 0.54 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.92 ± 0.56 | |
| Basal Part of Pons | 4.23 ± 0.69 | |
| Cerebellar Cortex | 3.62 ± 0.44 | |
| Cerebellar Nuclei | 4.2 ± 0.63 | |
| Claustrum | 3.68 ± 0.74 | |
| Epithalamus | 3.85 ± 1.03 | |
| Frontal Lobe | 3.88 ± 0.62 | |
| Globus Pallidus | 4.95 ± 0.42 | |
| Hypothalamus | 3.87 ± 0.65 | |
| Insula | 3.41 ± 0.59 | |
| Limbic Lobe | 3.86 ± 0.6 | |
| Mesencephalon | 4.02 ± 0.73 | |
| Myelencephalon | 4.03 ± 0.68 | |
| Occipital Lobe | 4.49 ± 0.56 | |
| Parietal Lobe | 4.1 ± 0.55 | |
| Pontine Tegmentum | 3.95 ± 0.55 | |
| Striatum | 4.58 ± 0.52 | |
| Subthalamus | 4.62 ± 0.22 | |
| Temporal Lobe | 3.87 ± 0.51 | |
| Thalamus | 4.22 ± 0.52 | |
| White Matter | 5.92 ± 0.09 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2310005P05Rik | CB | Cerebellum | 20.62 | |
| 50.01 | | |||
| 2310005P05Rik | CTX | Cerebral cortex | 57.88 | |
| 46.32 | | |||
| 2310005P05Rik | HIP | Hippocampal region | 27.88 | |
| 41.63 | | |||
| 2310005P05Rik | HPF | Hippocampal formation | 28.81 | |
| 34.64 | | |||
| 2310005P05Rik | HY | Hypothalamus | 7.38 | |
| 7.26 | | |||
| 2310005P05Rik | LSX | Lateral septal complex | 7.02 | |
| 6.44 | | |||
| 2310005P05Rik | MB | Midbrain | 10.32 | |
| 11.08 | | |||
| 2310005P05Rik | MY | Medulla | 10.64 | |
| 12.73 | | |||
| 2310005P05Rik | OLF | Olfactory bulb | 76.57 | |
| 83.28 | | |||
| 2310005P05Rik | P | Pons | 5.11 | |
| 6.85 | | |||
| 2310005P05Rik | PAL | Pallidum | 7.88 | |
| 7.3 | | |||
| 2310005P05Rik | RHP | Retrohippocampal region | 29.94 | |
| 26.81 | | |||
| 2310005P05Rik | sAMY | Striatum-like amygdalar nuclei | 17.65 | |
| 15.13 | | |||
| 2310005P05Rik | STR | Striatum | 31.95 | |
| 24.67 | | |||
| 2310005P05Rik | STRd | Striatum dorsal region | 41.01 | |
| 31.91 | | |||
| 2310005P05Rik | STRv | Striatum ventral region | 20.48 | |
| 14.76 | | |||
| 2310005P05Rik | TH | Thalamus | 15.92 | |
| 18.54 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00001712 | 20 | 117 | 136 | DLLAEQQPHHLATAVPLTPR | Peptide Atlas |