Annotation Detail for DPF3
Basic Information Top
| Gene Symbol: | DPF3 ( CERD4,FLJ14079 ) |
|---|---|
| Gene Full Name: | D4, zinc and double PHD fingers, family 3 |
| Band: | 14q24.2 |
| Quick Links | Entrez ID:8110; OMIM: 601672; Uniprot ID:DPF3_HUMAN; ENSEMBL ID: ENSG00000205683; HGNC ID: 17427 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.162868
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 21 / 564012 | 37 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 39 / 1939121 | 20 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 8 / 263845 | 30 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 4 / 68959 | 58 |  |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 126 / 3360307 | 37 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 52 / 1100989 | 47 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 15 / 211054 | 71 | |
| heart | 1 / 89626 | 11 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 16 / 211777 | 75 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 13 / 330442 | 39 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_32_P17416
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.42 ± 1.11 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.05 ± 0.41 | |
| Basal Part of Pons | 1.53 ± 0.43 | |
| Cerebellar Cortex | 2.98 ± 0.41 | |
| Cerebellar Nuclei | 2.45 ± 0.9 | |
| Claustrum | 3.12 ± 1.06 | |
| Epithalamus | 1.61 ± 0.87 | |
| Frontal Lobe | 1.94 ± 0.87 | |
| Globus Pallidus | 2.36 ± 0.93 | |
| Hypothalamus | 1.99 ± 0.63 | |
| Insula | 1.87 ± 0.6 | |
| Limbic Lobe | 2.14 ± 0.82 | |
| Mesencephalon | 2.21 ± 0.83 | |
| Myelencephalon | 2.12 ± 0.83 | |
| Occipital Lobe | 2.13 ± 0.64 | |
| Parietal Lobe | 2.11 ± 1.22 | |
| Pontine Tegmentum | 2.17 ± 0.86 | |
| Striatum | 1.77 ± 0.77 | |
| Subthalamus | 2.13 ± 0.75 | |
| Temporal Lobe | 1.94 ± 0.87 | |
| Thalamus | 1.97 ± 0.86 | |
| White Matter | 2.58 ± 0.57 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Dpf3 | CB | Cerebellum | 100 | |
| 100 | | |||
| Dpf3 | CTX | Cerebral cortex | 31.52 | |
| 23 | | |||
| Dpf3 | HIP | Hippocampal region | 39.21 | |
| 59.46 | | |||
| Dpf3 | HPF | Hippocampal formation | 31.61 | |
| 41.78 | | |||
| Dpf3 | HY | Hypothalamus | 9.71 | |
| 7.61 | | |||
| Dpf3 | LSX | Lateral septal complex | 8.07 | |
| 4.98 | | |||
| Dpf3 | MB | Midbrain | 15.36 | |
| 13.41 | | |||
| Dpf3 | MY | Medulla | 35.14 | |
| 36.85 | | |||
| Dpf3 | OLF | Olfactory bulb | 45.78 | |
| 40.17 | | |||
| Dpf3 | P | Pons | 26.42 | |
| 27.38 | | |||
| Dpf3 | PAL | Pallidum | 18.38 | |
| 15.6 | | |||
| Dpf3 | RHP | Retrohippocampal region | 13.87 | |
| 10.64 | | |||
| Dpf3 | sAMY | Striatum-like amygdalar nuclei | 23.19 | |
| 15.89 | | |||
| Dpf3 | STR | Striatum | 17.71 | |
| 12.21 | | |||
| Dpf3 | STRd | Striatum dorsal region | 14.81 | |
| 10.21 | | |||
| Dpf3 | STRv | Striatum ventral region | 26.72 | |
| 17.55 | | |||
| Dpf3 | TH | Thalamus | 16.9 | |
| 17.07 | |