AutismKB 2.0

Annotation Detail for RND2


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Basic Information Top
Gene Symbol:RND2 ( ARHN,RHO7,RhoN )
Gene Full Name: Rho family GTPase 2
Band: 17q21.31
Quick LinksEntrez ID:8153; OMIM: 601555; Uniprot ID:RND2_HUMAN; ENSEMBL ID: ENSG00000108830; HGNC ID: 18315
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst4 / 6231964
fetus1 / 5640121
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult33 / 193912117
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor7 / 26384526
glioma20 / 106883187
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia4 / 9725041
normal46 / 336030713
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain51 / 110098946
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue8 / 21572237
esophagus0 / 202090 
eye4 / 21105418
heart0 / 896260 
intestine0 / 2344720 
kidney2 / 2117779
larynx1 / 2414541
liver1 / 2077434
lung4 / 33697411
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta1 / 2808253
prostate3 / 18934515
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis14 / 33044242
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214393_at
Cell line Expression level Expression bar
721_B_lymphoblasts11.05
Adipocyte9.2
AdrenalCortex14.45
Adrenalgland8.45
Amygdala10.3
Appendix15.35
AtrioventricularNode10.6
BDCA4+_DentriticCells8.6
Bonemarrow11.6
BronchialEpithelialCells9.35
CD105+_Endothelial9.4
CD14+_Monocytes10.7
CD19+_BCells(neg._sel.)11.35
CD33+_Myeloid12.7
CD34+11.65
CD4+_Tcells9.6
CD56+_NKCells10.9
CD71+_EarlyErythroid9.4
CD8+_Tcells8.1
CardiacMyocytes19.6
Caudatenucleus9.1
Cerebellum7.9
CerebellumPeduncles13
CiliaryGanglion9.5
CingulateCortex10.15
Colorectaladenocarcinoma9.55
DorsalRootGanglion9.55
FetalThyroid9.7
Fetalbrain9.7
Fetalliver8.4
Fetallung6.7
GlobusPallidus8.05
Heart20.1
Hypothalamus14.1
Kidney8.35
Leukemia_chronicMyelogenousK-5628.3
Leukemia_promyelocytic-HL-608.1
Leukemialymphoblastic(MOLT-4)6.45
Liver15.2
Lung10.1
Lymphnode7.3
Lymphoma_burkitts(Daudi)12.8
Lymphoma_burkitts(Raji)16.3
MedullaOblongata9.15
OccipitalLobe8.6
OlfactoryBulb7.95
Ovary7.4
Pancreas7.85
PancreaticIslet10.3
ParietalLobe10.6
Pituitary10.9
Placenta8.45
Pons9.8
PrefrontalCortex13.2
Prostate11.15
Salivarygland9.3
SkeletalMuscle17.55
Skin8.9
SmoothMuscle11.9
Spinalcord24.85
SubthalamicNucleus9.7
SuperiorCervicalGanglion28.1
TemporalLobe11.7
Testis8.15
TestisGermCell8.05
TestisIntersitial8.4
TestisLeydigCell10.35
TestisSeminiferousTubule8.6
Thalamus10.2
Thymus6.65
Thyroid11.6
Tongue11.65
Tonsil9.7
Trachea7.5
TrigeminalGanglion15.9
Uterus8.1
UterusCorpus10.95
WholeBlood10.3
Wholebrain8.15
colon9.35
pineal_day12.72
pineal_night11.42
retina13.1
small_intestine8.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P434807
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.45 ± 0.57
Basal Forebrain4.98 ± 0.44
Basal Part of Pons5.21 ± 0.47
Cerebellar Cortex4.53 ± 0.34
Cerebellar Nuclei5.89 ± 0.42
Claustrum3.89 ± 0.6
Epithalamus5.44 ± 0.77
Frontal Lobe4.75 ± 0.57
Globus Pallidus7.14 ± 0.63
Hypothalamus5.63 ± 0.2
Insula4.69 ± 0.69
Limbic Lobe4.26 ± 0.64
Mesencephalon4.96 ± 0.75
Myelencephalon4.91 ± 0.53
Occipital Lobe4.25 ± 0.69
Parietal Lobe4.97 ± 0.6
Pontine Tegmentum4.92 ± 0.55
Striatum5.3 ± 0.69
Subthalamus5.49 ± 0.6
Temporal Lobe4.74 ± 0.52
Thalamus4.9 ± 0.61
White Matter4.24 ± 0.76
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rnd2CBCerebellum100
100
Rnd2CTXCerebral cortex100
100
Rnd2HIPHippocampal region100
100
Rnd2HPFHippocampal formation100
100
Rnd2HYHypothalamus100
100
Rnd2LSXLateral septal complex100
100
Rnd2MBMidbrain100
100
Rnd2MYMedulla100
100
Rnd2OLFOlfactory bulb100
100
Rnd2PPons100
100
Rnd2PALPallidum100
100
Rnd2RHPRetrohippocampal region100
100
Rnd2sAMYStriatum-like amygdalar nuclei100
100
Rnd2STRStriatum100
100
Rnd2STRdStriatum dorsal region100
100
Rnd2STRvStriatum ventral region100
100
Rnd2THThalamus100
100
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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