Annotation Detail for STMN4
Basic Information Top
Gene Symbol: | STMN4 ( MGC111012,RB3 ) |
---|---|
Gene Full Name: | stathmin-like 4 |
Band: | 8p21.2 |
Quick Links | Entrez ID:81551; OMIM: NA; Uniprot ID:STMN4_HUMAN; ENSEMBL ID: ENSG00000015592; HGNC ID: 16078 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.201058
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 0 / 70761 | 0 | |
blastocyst | 0 / 62319 | 0 | |
fetus | 64 / 564012 | 113 | |
neonate | 0 / 31097 | 0 | |
infant | 9 / 23620 | 381 | |
juvenile | 1 / 55556 | 17 | |
adult | 53 / 1939121 | 27 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 221236_s_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 6.55 | |
Adipocyte | 5.75 | |
AdrenalCortex | 6.2 | |
Adrenalgland | 5.25 | |
Amygdala | 736.5 | |
Appendix | 7.85 | |
AtrioventricularNode | 27.95 | |
BDCA4+_DentriticCells | 5.75 | |
Bonemarrow | 6.75 | |
BronchialEpithelialCells | 5.2 | |
CD105+_Endothelial | 5.65 | |
CD14+_Monocytes | 6.1 | |
CD19+_BCells(neg._sel.) | 5.9 | |
CD33+_Myeloid | 6.7 | |
CD34+ | 7.1 | |
CD4+_Tcells | 5.8 | |
CD56+_NKCells | 6.35 | |
CD71+_EarlyErythroid | 5.4 | |
CD8+_Tcells | 4.95 | |
CardiacMyocytes | 7.65 | |
Caudatenucleus | 174 | |
Cerebellum | 154.55 | |
CerebellumPeduncles | 201.2 | |
CiliaryGanglion | 7.95 | |
CingulateCortex | 423.6 | |
Colorectaladenocarcinoma | 5.9 | |
DorsalRootGanglion | 13.1 | |
FetalThyroid | 5.6 | |
Fetalbrain | 1185.5 | |
Fetalliver | 5 | |
Fetallung | 4.35 | |
GlobusPallidus | 206.8 | |
Heart | 7.5 | |
Hypothalamus | 471.45 | |
Kidney | 6.3 | |
Leukemia_chronicMyelogenousK-562 | 4.9 | |
Leukemia_promyelocytic-HL-60 | 4.9 | |
Leukemialymphoblastic(MOLT-4) | 4.55 | |
Liver | 7.9 | |
Lung | 6.1 | |
Lymphnode | 4.9 | |
Lymphoma_burkitts(Daudi) | 7.1 | |
Lymphoma_burkitts(Raji) | 8.2 | |
MedullaOblongata | 241.55 | |
OccipitalLobe | 356.4 | |
OlfactoryBulb | 10.15 | |
Ovary | 4.15 | |
Pancreas | 5.2 | |
PancreaticIslet | 5.95 | |
ParietalLobe | 501.8 | |
Pituitary | 8.35 | |
Placenta | 5.5 | |
Pons | 74.2 | |
PrefrontalCortex | 359.05 | |
Prostate | 6.95 | |
Salivarygland | 5.95 | |
SkeletalMuscle | 7.55 | |
Skin | 26.25 | |
SmoothMuscle | 6.35 | |
Spinalcord | 463.95 | |
SubthalamicNucleus | 221.7 | |
SuperiorCervicalGanglion | 17.45 | |
TemporalLobe | 122.4 | |
Testis | 4.85 | |
TestisGermCell | 4.4 | |
TestisIntersitial | 4.9 | |
TestisLeydigCell | 5.85 | |
TestisSeminiferousTubule | 5.1 | |
Thalamus | 305.3 | |
Thymus | 4.4 | |
Thyroid | 6.7 | |
Tongue | 6.6 | |
Tonsil | 5.45 | |
Trachea | 4.8 | |
TrigeminalGanglion | 17.6 | |
Uterus | 4.4 | |
UterusCorpus | 5.3 | |
WholeBlood | 6.15 | |
Wholebrain | 822.3 | |
colon | 5.6 | |
pineal_day | 17.7 | |
pineal_night | 20.48 | |
retina | 108.6 | |
small_intestine | 5.45 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: CUST_2199_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 8.08 ± 0.33 | |
Basal Forebrain | 7.69 ± 0.28 | |
Basal Part of Pons | 8.18 ± 0.6 | |
Cerebellar Cortex | 7.92 ± 0.36 | |
Cerebellar Nuclei | 8.14 ± 0.4 | |
Claustrum | 7.98 ± 0.45 | |
Epithalamus | 6.79 ± 1.04 | |
Frontal Lobe | 8.09 ± 0.52 | |
Globus Pallidus | 8.76 ± 0.23 | |
Hypothalamus | 7.33 ± 0.48 | |
Insula | 8.09 ± 0.33 | |
Limbic Lobe | 8.1 ± 0.47 | |
Mesencephalon | 7.76 ± 0.64 | |
Myelencephalon | 7.96 ± 0.54 | |
Occipital Lobe | 7.58 ± 0.53 | |
Parietal Lobe | 7.88 ± 0.39 | |
Pontine Tegmentum | 8.04 ± 0.44 | |
Striatum | 7.41 ± 0.44 | |
Subthalamus | 7.81 ± 0.18 | |
Temporal Lobe | 8.19 ± 0.45 | |
Thalamus | 8.17 ± 0.26 | |
White Matter | 9.97 ± 0.19 |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Stmn4 | CB | Cerebellum | 63.61 | |
96.57 | ||||
Stmn4 | CTX | Cerebral cortex | 100 | |
100 | ||||
Stmn4 | HIP | Hippocampal region | 97.47 | |
100 | ||||
Stmn4 | HPF | Hippocampal formation | 100 | |
100 | ||||
Stmn4 | HY | Hypothalamus | 100 | |
99.06 | ||||
Stmn4 | LSX | Lateral septal complex | 100 | |
91.36 | ||||
Stmn4 | MB | Midbrain | 100 | |
100 | ||||
Stmn4 | MY | Medulla | 100 | |
100 | ||||
Stmn4 | OLF | Olfactory bulb | 100 | |
100 | ||||
Stmn4 | P | Pons | 100 | |
100 | ||||
Stmn4 | PAL | Pallidum | 100 | |
99.64 | ||||
Stmn4 | RHP | Retrohippocampal region | 100 | |
100 | ||||
Stmn4 | sAMY | Striatum-like amygdalar nuclei | 93.13 | |
84.57 | ||||
Stmn4 | STR | Striatum | 99.55 | |
94.28 | ||||
Stmn4 | STRd | Striatum dorsal region | 98.86 | |
93.29 | ||||
Stmn4 | STRv | Striatum ventral region | 100 | |
93.36 | ||||
Stmn4 | TH | Thalamus | 100 | |
100 |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00071729 | 8 | 124 | 131 | KLEAAEER | Peptide Atlas |