Annotation Detail for C15orf44
Basic Information Top
| Gene Symbol: | C15orf44 ( DKFZp564O1664 ) |
|---|---|
| Gene Full Name: | chromosome 15 open reading frame 44 |
| Band: | 15q22.31 |
| Quick Links | Entrez ID:81556; OMIM: NA; Uniprot ID:CO044_HUMAN; ENSEMBL ID: ENSG00000138614; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.6686
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 8 / 70761 | 113 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 41 / 564012 | 72 | |
| neonate | 5 / 31097 | 160 | |
| infant | 5 / 23620 | 211 |  |
| juvenile | 9 / 55556 | 161 | |
| adult | 116 / 1939121 | 59 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 6 / 34366 | 174 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 11 / 119369 | 92 | |
| germ cell tumor | 32 / 263845 | 121 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 7 / 136302 | 51 | |
| kidney tumor | 6 / 68959 | 87 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 6 / 103127 | 58 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 10 / 97250 | 102 | |
| normal | 223 / 3360307 | 66 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 18 / 125680 | 143 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 8 / 46356 | 172 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 9 / 125191 | 71 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 3 / 29757 | 100 | |
| blood | 5 / 123478 | 40 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 72 / 1100989 | 65 | |
| cervix | 9 / 48171 | 186 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 15 / 215722 | 69 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 13 / 211054 | 61 | |
| heart | 10 / 89626 | 111 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 26 / 211777 | 122 | |
| larynx | 1 / 24145 | 41 | |
| liver | 9 / 207743 | 43 | |
| lung | 26 / 336974 | 77 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 8 / 91610 | 87 | |
| mammary gland | 9 / 153271 | 58 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 7 / 107715 | 64 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 14 / 280825 | 49 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 14 / 210574 | 66 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 10 / 96619 | 103 | |
| testis | 30 / 330442 | 90 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 2 / 16999 | 117 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 11 / 51780 | 212 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 221265_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 6.25 |  |
| Adipocyte | 5.1 | |
| AdrenalCortex | 5.4 | |
| Adrenalgland | 4.3 | |
| Amygdala | 5.1 | |
| Appendix | 5.2 | |
| AtrioventricularNode | 4 | |
| BDCA4+_DentriticCells | 5.15 | |
| Bonemarrow | 5.1 | |
| BronchialEpithelialCells | 4.9 | |
| CD105+_Endothelial | 5.05 | |
| CD14+_Monocytes | 5.3 | |
| CD19+_BCells(neg._sel.) | 5.2 | |
| CD33+_Myeloid | 6.15 | |
| CD34+ | 6.35 | |
| CD4+_Tcells | 5.35 | |
| CD56+_NKCells | 5.6 | |
| CD71+_EarlyErythroid | 4.6 | |
| CD8+_Tcells | 5 | |
| CardiacMyocytes | 6.8 | |
| Caudatenucleus | 4.5 | |
| Cerebellum | 4.15 | |
| CerebellumPeduncles | 5.75 | |
| CiliaryGanglion | 3.75 | |
| CingulateCortex | 5.2 | |
| Colorectaladenocarcinoma | 5.1 | |
| DorsalRootGanglion | 3.9 | |
| FetalThyroid | 4.9 | |
| Fetalbrain | 4.85 | |
| Fetalliver | 4.45 | |
| Fetallung | 4.3 | |
| GlobusPallidus | 3.8 | |
| Heart | 6.6 | |
| Hypothalamus | 5.55 | |
| Kidney | 4.2 | |
| Leukemia_chronicMyelogenousK-562 | 4.6 | |
| Leukemia_promyelocytic-HL-60 | 4.55 | |
| Leukemialymphoblastic(MOLT-4) | 4.4 | |
| Liver | 6.8 | |
| Lung | 5.55 | |
| Lymphnode | 4.3 | |
| Lymphoma_burkitts(Daudi) | 6.6 | |
| Lymphoma_burkitts(Raji) | 7.15 | |
| MedullaOblongata | 4.75 | |
| OccipitalLobe | 4.55 | |
| OlfactoryBulb | 4 | |
| Ovary | 3.3 | |
| Pancreas | 4 | |
| PancreaticIslet | 5.5 | |
| ParietalLobe | 5.3 | |
| Pituitary | 6 | |
| Placenta | 5.25 | |
| Pons | 4.8 | |
| PrefrontalCortex | 6.25 | |
| Prostate | 5.95 | |
| Salivarygland | 4 | |
| SkeletalMuscle | 5.9 | |
| Skin | 3.95 | |
| SmoothMuscle | 5.75 | |
| Spinalcord | 5.55 | |
| SubthalamicNucleus | 4.6 | |
| SuperiorCervicalGanglion | 5.95 | |
| TemporalLobe | 4.65 | |
| Testis | 5.55 | |
| TestisGermCell | 4.2 | |
| TestisIntersitial | 4.25 | |
| TestisLeydigCell | 5 | |
| TestisSeminiferousTubule | 4.4 | |
| Thalamus | 5.1 | |
| Thymus | 4.05 | |
| Thyroid | 6.3 | |
| Tongue | 4.85 | |
| Tonsil | 4.8 | |
| Trachea | 4.3 | |
| TrigeminalGanglion | 5.15 | |
| Uterus | 4.1 | |
| UterusCorpus | 4.45 | |
| WholeBlood | 5.45 | |
| Wholebrain | 4.15 | |
| colon | 5.2 | |
| pineal_day | 6.22 | |
| pineal_night | 6.08 | |
| retina | 6.125 | |
| small_intestine | 5 | |
- Probe name: A_23_P37475
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.2 ± 0.33 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.45 ± 0.2 | |
| Basal Part of Pons | 6.42 ± 0.32 | |
| Cerebellar Cortex | 6.53 ± 0.24 | |
| Cerebellar Nuclei | 6.64 ± 0.25 | |
| Claustrum | 5.96 ± 0.6 | |
| Epithalamus | 6.9 ± 0.39 | |
| Frontal Lobe | 6.45 ± 0.32 | |
| Globus Pallidus | 6.81 ± 0.18 | |
| Hypothalamus | 6.76 ± 0.21 | |
| Insula | 6.53 ± 0.27 | |
| Limbic Lobe | 6.25 ± 0.32 | |
| Mesencephalon | 6.51 ± 0.33 | |
| Myelencephalon | 6.44 ± 0.37 | |
| Occipital Lobe | 6.42 ± 0.45 | |
| Parietal Lobe | 6.41 ± 0.38 | |
| Pontine Tegmentum | 6.51 ± 0.42 | |
| Striatum | 6.59 ± 0.35 | |
| Subthalamus | 6.71 ± 0.26 | |
| Temporal Lobe | 6.42 ± 0.35 | |
| Thalamus | 6.47 ± 0.32 | |
| White Matter | 7.18 ± 0.31 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2010321M09Rik | CB | Cerebellum | 6.28 | |
| 7.18 | | |||
| 2010321M09Rik | CTX | Cerebral cortex | 5.43 | |
| 2.81 | | |||
| 2010321M09Rik | HIP | Hippocampal region | 4.77 | |
| 4.03 | | |||
| 2010321M09Rik | HPF | Hippocampal formation | 3.91 | |
| 3.06 | | |||
| 2010321M09Rik | HY | Hypothalamus | 0.87 | |
| 0.64 | | |||
| 2010321M09Rik | LSX | Lateral septal complex | 2.25 | |
| 1.2 | | |||
| 2010321M09Rik | MB | Midbrain | 1.95 | |
| 1.52 | | |||
| 2010321M09Rik | MY | Medulla | 1.5 | |
| 1.59 | | |||
| 2010321M09Rik | OLF | Olfactory bulb | 10.97 | |
| 6.58 | | |||
| 2010321M09Rik | P | Pons | 1.14 | |
| 1.08 | | |||
| 2010321M09Rik | PAL | Pallidum | 0.86 | |
| 0.74 | | |||
| 2010321M09Rik | RHP | Retrohippocampal region | 2.27 | |
| 1.54 | | |||
| 2010321M09Rik | sAMY | Striatum-like amygdalar nuclei | 1.8 | |
| 1.4 | | |||
| 2010321M09Rik | STR | Striatum | 2 | |
| 1.21 | | |||
| 2010321M09Rik | STRd | Striatum dorsal region | 1.52 | |
| 0.91 | | |||
| 2010321M09Rik | STRv | Striatum ventral region | 3.24 | |
| 1.63 | | |||
| 2010321M09Rik | TH | Thalamus | 2.02 | |
| 2.01 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00069623 | 10 | 271 | 280 | HLVLPIALNK | Peptide Atlas |