AutismKB 2.0

Annotation Detail for C15orf44


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:C15orf44 ( DKFZp564O1664 )
Gene Full Name: chromosome 15 open reading frame 44
Band: 15q22.31
Quick LinksEntrez ID:81556; OMIM: NA; Uniprot ID:CO044_HUMAN; ENSEMBL ID: ENSG00000138614; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body8 / 70761113
blastocyst3 / 6231948
fetus41 / 56401272
neonate5 / 31097160
infant5 / 23620211
juvenile9 / 55556161
adult116 / 193912159
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor6 / 9417863
cervical tumor6 / 34366174
chondrosarcoma5 / 8282360
colorectal tumor4 / 11424635
esophageal tumor1 / 1729057
gastrointestinal tumor11 / 11936992
germ cell tumor32 / 263845121
glioma2 / 10688318
head and neck tumor7 / 13630251
kidney tumor6 / 6895987
leukemia3 / 9584231
liver tumor6 / 9635962
lung tumor6 / 10312758
lymphoma3 / 7175541
non-neoplasia10 / 97250102
normal223 / 336030766
ovarian tumor6 / 7668278
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS18 / 125680143
prostate cancer3 / 10268029
retinoblastoma8 / 46356172
skin tumor3 / 12494924
soft tissue/muscle tissue tumor9 / 12519171
uterine tumor7 / 9025777
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites0 / 400150 
bladder3 / 29757100
blood5 / 12347840
bone3 / 7165541
bone marrow2 / 4880140
brain72 / 110098965
cervix9 / 48171186
connective tissue4 / 14925526
ear0 / 162120 
embryonic tissue15 / 21572269
esophagus1 / 2020949
eye13 / 21105461
heart10 / 89626111
intestine13 / 23447255
kidney26 / 211777122
larynx1 / 2414541
liver9 / 20774343
lung26 / 33697477
lymph1 / 4427022
lymph node8 / 9161087
mammary gland9 / 15327158
mouth3 / 6705244
muscle7 / 10771564
nerve0 / 157680 
ovary8 / 10205178
pancreas10 / 21481246
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta14 / 28082549
prostate6 / 18934531
salivary gland0 / 201550 
skin14 / 21057466
spleen3 / 5395255
stomach10 / 96619103
testis30 / 33044290
thymus2 / 8113124
thyroid3 / 4747363
tonsil2 / 16999117
trachea3 / 5241357
umbilical cord0 / 136800 
uterus15 / 23287864
vascular11 / 51780212
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 221265_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.25
Adipocyte5.1
AdrenalCortex5.4
Adrenalgland4.3
Amygdala5.1
Appendix5.2
AtrioventricularNode4
BDCA4+_DentriticCells5.15
Bonemarrow5.1
BronchialEpithelialCells4.9
CD105+_Endothelial5.05
CD14+_Monocytes5.3
CD19+_BCells(neg._sel.)5.2
CD33+_Myeloid6.15
CD34+6.35
CD4+_Tcells5.35
CD56+_NKCells5.6
CD71+_EarlyErythroid4.6
CD8+_Tcells5
CardiacMyocytes6.8
Caudatenucleus4.5
Cerebellum4.15
CerebellumPeduncles5.75
CiliaryGanglion3.75
CingulateCortex5.2
Colorectaladenocarcinoma5.1
DorsalRootGanglion3.9
FetalThyroid4.9
Fetalbrain4.85
Fetalliver4.45
Fetallung4.3
GlobusPallidus3.8
Heart6.6
Hypothalamus5.55
Kidney4.2
Leukemia_chronicMyelogenousK-5624.6
Leukemia_promyelocytic-HL-604.55
Leukemialymphoblastic(MOLT-4)4.4
Liver6.8
Lung5.55
Lymphnode4.3
Lymphoma_burkitts(Daudi)6.6
Lymphoma_burkitts(Raji)7.15
MedullaOblongata4.75
OccipitalLobe4.55
OlfactoryBulb4
Ovary3.3
Pancreas4
PancreaticIslet5.5
ParietalLobe5.3
Pituitary6
Placenta5.25
Pons4.8
PrefrontalCortex6.25
Prostate5.95
Salivarygland4
SkeletalMuscle5.9
Skin3.95
SmoothMuscle5.75
Spinalcord5.55
SubthalamicNucleus4.6
SuperiorCervicalGanglion5.95
TemporalLobe4.65
Testis5.55
TestisGermCell4.2
TestisIntersitial4.25
TestisLeydigCell5
TestisSeminiferousTubule4.4
Thalamus5.1
Thymus4.05
Thyroid6.3
Tongue4.85
Tonsil4.8
Trachea4.3
TrigeminalGanglion5.15
Uterus4.1
UterusCorpus4.45
WholeBlood5.45
Wholebrain4.15
colon5.2
pineal_day6.22
pineal_night6.08
retina6.125
small_intestine5
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P37475
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.2 ± 0.33
Basal Forebrain6.45 ± 0.2
Basal Part of Pons6.42 ± 0.32
Cerebellar Cortex6.53 ± 0.24
Cerebellar Nuclei6.64 ± 0.25
Claustrum5.96 ± 0.6
Epithalamus6.9 ± 0.39
Frontal Lobe6.45 ± 0.32
Globus Pallidus6.81 ± 0.18
Hypothalamus6.76 ± 0.21
Insula6.53 ± 0.27
Limbic Lobe6.25 ± 0.32
Mesencephalon6.51 ± 0.33
Myelencephalon6.44 ± 0.37
Occipital Lobe6.42 ± 0.45
Parietal Lobe6.41 ± 0.38
Pontine Tegmentum6.51 ± 0.42
Striatum6.59 ± 0.35
Subthalamus6.71 ± 0.26
Temporal Lobe6.42 ± 0.35
Thalamus6.47 ± 0.32
White Matter7.18 ± 0.31
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
2010321M09RikCBCerebellum6.28
7.18
2010321M09RikCTXCerebral cortex5.43
2.81
2010321M09RikHIPHippocampal region4.77
4.03
2010321M09RikHPFHippocampal formation3.91
3.06
2010321M09RikHYHypothalamus0.87
0.64
2010321M09RikLSXLateral septal complex2.25
1.2
2010321M09RikMBMidbrain1.95
1.52
2010321M09RikMYMedulla1.5
1.59
2010321M09RikOLFOlfactory bulb10.97
6.58
2010321M09RikPPons1.14
1.08
2010321M09RikPALPallidum0.86
0.74
2010321M09RikRHPRetrohippocampal region2.27
1.54
2010321M09RiksAMYStriatum-like amygdalar nuclei1.8
1.4
2010321M09RikSTRStriatum2
1.21
2010321M09RikSTRdStriatum dorsal region1.52
0.91
2010321M09RikSTRvStriatum ventral region3.24
1.63
2010321M09RikTHThalamus2.02
2.01
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00069623 10 271 280 HLVLPIALNK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018