Annotation Detail for C1orf21
Basic Information Top
| Gene Symbol: | C1orf21 ( PIG13 ) |
|---|---|
| Gene Full Name: | chromosome 1 open reading frame 21 |
| Band: | 1q25.3 |
| Quick Links | Entrez ID:81563; OMIM: NA; Uniprot ID:CA021_HUMAN; ENSEMBL ID: ENSG00000116667; HGNC ID: 15494 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.726770
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 39 / 564012 | 69 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 113 / 1939121 | 58 | |
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 0 / 564012 | 0 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 1 / 1939121 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 4 / 12794 | 312 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 7 / 82823 | 84 | |
| colorectal tumor | 8 / 114246 | 70 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 20 / 263845 | 75 | |
| glioma | 13 / 106883 | 121 | |
| head and neck tumor | 6 / 136302 | 44 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 8 / 97250 | 82 | |
| normal | 192 / 3360307 | 57 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 1 / 104616 | 9 |  |
| primitive neuroectodermal tumor of the CNS | 8 / 125680 | 63 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 10 / 124949 | 80 | |
| soft tissue/muscle tissue tumor | 12 / 125191 | 95 | |
| uterine tumor | 0 / 90257 | 0 | |
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 3 / 3360307 | 0 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 5 / 33197 | 150 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 66 / 1100989 | 59 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 17 / 149255 | 113 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 13 / 211054 | 61 | |
| heart | 3 / 89626 | 33 | |
| intestine | 12 / 234472 | 51 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 1 / 24145 | 41 | |
| liver | 7 / 207743 | 33 | |
| lung | 11 / 336974 | 32 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 6 / 153271 | 39 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 10 / 107715 | 92 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 20 / 189345 | 105 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 19 / 210574 | 90 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 5 / 96619 | 51 | |
| testis | 15 / 330442 | 45 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 | |
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 0 / 1100989 | 0 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 221272_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 5.05 | |
| Adipocyte | 4.85 | |
| AdrenalCortex | 5.9 | |
| Adrenalgland | 4.55 | |
| Amygdala | 24.55 | |
| Appendix | 6.75 | |
| AtrioventricularNode | 3.85 | |
| BDCA4+_DentriticCells | 5.2 | |
| Bonemarrow | 5 | |
| BronchialEpithelialCells | 4.6 | |
| CD105+_Endothelial | 4.75 | |
| CD14+_Monocytes | 5 | |
| CD19+_BCells(neg._sel.) | 4.65 | |
| CD33+_Myeloid | 6.2 | |
| CD34+ | 6.2 | |
| CD4+_Tcells | 4.5 | |
| CD56+_NKCells | 5.85 | |
| CD71+_EarlyErythroid | 4.45 | |
| CD8+_Tcells | 4.4 | |
| CardiacMyocytes | 6.1 | |
| Caudatenucleus | 6.55 | |
| Cerebellum | 16.75 | |
| CerebellumPeduncles | 29.3 | |
| CiliaryGanglion | 4.45 | |
| CingulateCortex | 32.75 | |
| Colorectaladenocarcinoma | 4.95 | |
| DorsalRootGanglion | 4.2 | |
| FetalThyroid | 5.2 | |
| Fetalbrain | 31.1 | |
| Fetalliver | 4.25 | |
| Fetallung | 4.2 | |
| GlobusPallidus | 19.95 | |
| Heart | 6.3 | |
| Hypothalamus | 9.05 | |
| Kidney | 3.95 | |
| Leukemia_chronicMyelogenousK-562 | 4.5 | |
| Leukemia_promyelocytic-HL-60 | 3.9 | |
| Leukemialymphoblastic(MOLT-4) | 4.05 | |
| Liver | 6.65 | |
| Lung | 7.65 | |
| Lymphnode | 4.15 | |
| Lymphoma_burkitts(Daudi) | 6 | |
| Lymphoma_burkitts(Raji) | 6.65 | |
| MedullaOblongata | 21.65 | |
| OccipitalLobe | 48.95 | |
| OlfactoryBulb | 3.6 | |
| Ovary | 3.55 | |
| Pancreas | 4 | |
| PancreaticIslet | 5.8 | |
| ParietalLobe | 36.95 | |
| Pituitary | 5.75 | |
| Placenta | 5.25 | |
| Pons | 11.15 | |
| PrefrontalCortex | 47.65 | |
| Prostate | 5.95 | |
| Salivarygland | 3.85 | |
| SkeletalMuscle | 12.25 | |
| Skin | 3.95 | |
| SmoothMuscle | 5.25 | |
| Spinalcord | 7.45 | |
| SubthalamicNucleus | 11.7 | |
| SuperiorCervicalGanglion | 6.1 | |
| TemporalLobe | 27.05 | |
| Testis | 4.2 | |
| TestisGermCell | 4.5 | |
| TestisIntersitial | 4.1 | |
| TestisLeydigCell | 4.9 | |
| TestisSeminiferousTubule | 6.25 | |
| Thalamus | 18.9 | |
| Thymus | 3.9 | |
| Thyroid | 5.8 | |
| Tongue | 5.1 | |
| Tonsil | 4.65 | |
| Trachea | 4.95 | |
| TrigeminalGanglion | 4.9 | |
| Uterus | 5.35 | |
| UterusCorpus | 5.35 | |
| WholeBlood | 5.55 | |
| Wholebrain | 35.45 | |
| colon | 5 | |
| pineal_day | 6.14 | |
| pineal_night | 6.16 | |
| retina | 6.9 | |
| small_intestine | 4.85 | |
- Probe name: A_32_P151317
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 15.49 ± 0.58 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 15.25 ± 0.15 | |
| Basal Part of Pons | 15.52 ± 0.3 | |
| Cerebellar Cortex | 14.85 ± 0.3 | |
| Cerebellar Nuclei | 15.54 ± 0.24 | |
| Claustrum | 15.41 ± 0.48 | |
| Epithalamus | 14.73 ± 0.34 | |
| Frontal Lobe | 15.28 ± 0.44 | |
| Globus Pallidus | 15.83 ± 0.29 | |
| Hypothalamus | 14.97 ± 0.43 | |
| Insula | 15.07 ± 0.56 | |
| Limbic Lobe | 15.37 ± 0.53 | |
| Mesencephalon | 15.17 ± 0.44 | |
| Myelencephalon | 15.29 ± 0.54 | |
| Occipital Lobe | 15.16 ± 0.63 | |
| Parietal Lobe | 15.17 ± 0.41 | |
| Pontine Tegmentum | 15.1 ± 0.46 | |
| Striatum | 15.55 ± 0.48 | |
| Subthalamus | 15 ± 0.57 | |
| Temporal Lobe | 15.17 ± 0.47 | |
| Thalamus | 15.33 ± 0.51 | |
| White Matter | 15.61 ± 0.29 | |
Mouse Brain ISH 