AutismKB 2.0

Annotation Detail for CAMK2G


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Basic Information Top
Gene Symbol:CAMK2G ( CAMK,CAMK-II,CAMKG,FLJ16043,MGC26678 )
Gene Full Name: calcium/calmodulin-dependent protein kinase II gamma
Band: 10q22.2
Quick LinksEntrez ID:818; OMIM: 602123; Uniprot ID:KCC2G_HUMAN; ENSEMBL ID: ENSG00000148660; HGNC ID: 1463
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst3 / 6231948
fetus48 / 56401285
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult208 / 1939121107
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor9 / 9417895
cervical tumor1 / 3436629
chondrosarcoma10 / 82823120
colorectal tumor10 / 11424687
esophageal tumor1 / 1729057
gastrointestinal tumor5 / 11936941
germ cell tumor9 / 26384534
glioma6 / 10688356
head and neck tumor5 / 13630236
kidney tumor2 / 6895929
leukemia5 / 9584252
liver tumor6 / 9635962
lung tumor6 / 10312758
lymphoma4 / 7175555
non-neoplasia12 / 97250123
normal333 / 336030799
ovarian tumor13 / 76682169
pancreatic tumor12 / 104616114
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer4 / 10268038
retinoblastoma5 / 46356107
skin tumor6 / 12494948
soft tissue/muscle tissue tumor6 / 12519147
uterine tumor7 / 9025777
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites2 / 4001549
bladder3 / 29757100
blood5 / 12347840
bone5 / 7165569
bone marrow4 / 4880181
brain173 / 1100989157
cervix1 / 4817120
connective tissue9 / 14925560
ear0 / 162120 
embryonic tissue10 / 21572246
esophagus1 / 2020949
eye25 / 211054118
heart4 / 8962644
intestine29 / 234472123
kidney6 / 21177728
larynx0 / 241450 
liver8 / 20774338
lung22 / 33697465
lymph4 / 4427090
lymph node2 / 9161021
mammary gland13 / 15327184
mouth4 / 6705259
muscle8 / 10771574
nerve1 / 1576863
ovary14 / 102051137
pancreas18 / 21481283
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland1 / 1658560
placenta31 / 280825110
prostate15 / 18934579
salivary gland0 / 201550 
skin7 / 21057433
spleen4 / 5395274
stomach6 / 9661962
testis4 / 33044212
thymus4 / 8113149
thyroid1 / 4747321
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus29 / 232878124
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212757_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts69.55
Adipocyte49.15
AdrenalCortex26.8
Adrenalgland32.7
Amygdala688.05
Appendix56.55
AtrioventricularNode19.85
BDCA4+_DentriticCells66.1
Bonemarrow63.25
BronchialEpithelialCells37.75
CD105+_Endothelial45
CD14+_Monocytes103.3
CD19+_BCells(neg._sel.)72.8
CD33+_Myeloid174.95
CD34+97.4
CD4+_Tcells193.6
CD56+_NKCells127.6
CD71+_EarlyErythroid37.05
CD8+_Tcells217.9
CardiacMyocytes42.9
Caudatenucleus98.9
Cerebellum126.8
CerebellumPeduncles208.65
CiliaryGanglion41.2
CingulateCortex557.55
Colorectaladenocarcinoma30.1
DorsalRootGanglion41.65
FetalThyroid42.85
Fetalbrain185.3
Fetalliver15.7
Fetallung35.95
GlobusPallidus273.5
Heart50.25
Hypothalamus401.1
Kidney46.5
Leukemia_chronicMyelogenousK-56232.35
Leukemia_promyelocytic-HL-6058.75
Leukemialymphoblastic(MOLT-4)60.9
Liver39.5
Lung50.1
Lymphnode42.45
Lymphoma_burkitts(Daudi)89.9
Lymphoma_burkitts(Raji)70.1
MedullaOblongata363.5
OccipitalLobe535.2
OlfactoryBulb39.35
Ovary18.6
Pancreas31.6
PancreaticIslet31.95
ParietalLobe486.85
Pituitary36.3
Placenta212.25
Pons232.15
PrefrontalCortex1290.55
Prostate61.85
Salivarygland42.4
SkeletalMuscle62.85
Skin36.5
SmoothMuscle52.65
Spinalcord308.25
SubthalamicNucleus539.3
SuperiorCervicalGanglion55.45
TemporalLobe376.55
Testis23.95
TestisGermCell31.45
TestisIntersitial27.5
TestisLeydigCell34.4
TestisSeminiferousTubule36.05
Thalamus378.9
Thymus35
Thyroid61.3
Tongue56.75
Tonsil46.3
Trachea39.2
TrigeminalGanglion38.6
Uterus74.6
UterusCorpus37.25
WholeBlood221.35
Wholebrain921.25
colon54.1
pineal_day662
pineal_night650.64
retina259.875
small_intestine85.3
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P46903
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.58 ± 0.47
Basal Forebrain6.95 ± 0.33
Basal Part of Pons7.5 ± 0.31
Cerebellar Cortex6.84 ± 0.37
Cerebellar Nuclei7.29 ± 0.28
Claustrum6.1 ± 0.73
Epithalamus6.97 ± 0.58
Frontal Lobe7.13 ± 0.56
Globus Pallidus7.1 ± 0.36
Hypothalamus7.22 ± 0.21
Insula7.05 ± 0.3
Limbic Lobe6.71 ± 0.56
Mesencephalon7.03 ± 0.64
Myelencephalon7.07 ± 0.49
Occipital Lobe7.6 ± 0.54
Parietal Lobe7.25 ± 0.57
Pontine Tegmentum6.98 ± 0.66
Striatum5.9 ± 0.61
Subthalamus7.26 ± 0.14
Temporal Lobe7.03 ± 0.4
Thalamus7.34 ± 0.46
White Matter5.06 ± 0.44
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Camk2gCBCerebellum100
100
Camk2gCTXCerebral cortex100
100
Camk2gHIPHippocampal region100
100
Camk2gHPFHippocampal formation100
100
Camk2gHYHypothalamus100
100
Camk2gLSXLateral septal complex100
95.18
Camk2gMBMidbrain100
100
Camk2gMYMedulla100
100
Camk2gOLFOlfactory bulb100
100
Camk2gPPons100
100
Camk2gPALPallidum100
100
Camk2gRHPRetrohippocampal region100
100
Camk2gsAMYStriatum-like amygdalar nuclei100
100
Camk2gSTRStriatum100
100
Camk2gSTRdStriatum dorsal region100
100
Camk2gSTRvStriatum ventral region100
100
Camk2gTHThalamus100
98.65
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00003704 25 389 413 ICDPGLTSFEPEALGNLVEGMDFHK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018