Annotation Detail for MED25
Basic Information Top
| Gene Symbol: | MED25 ( ACID1,ARC92,CMT2B2,DKFZp434K0512,MGC70671,P78,PTOV2 ) |
|---|---|
| Gene Full Name: | mediator complex subunit 25 |
| Band: | 19q13.3 |
| Quick Links | Entrez ID:81857; OMIM: 610197; Uniprot ID:MED25_HUMAN; ENSEMBL ID: ENSG00000104973; HGNC ID: 28845 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.656639
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 2 / 564012 | 3 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 47 / 1939121 | 24 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 9 / 106883 | 84 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 45 / 3360307 | 13 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 10 / 46356 | 215 |  |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 7 / 125191 | 55 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 19 / 1100989 | 17 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 10 / 215722 | 46 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 15 / 211054 | 71 | |
| heart | 0 / 89626 | 0 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 2 / 24145 | 82 | |
| liver | 2 / 207743 | 9 | |
| lung | 6 / 336974 | 17 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 11 / 214812 | 51 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 10 / 330442 | 30 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 1 / 51780 | 19 | |
- Probe name: A_23_P153510
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.78 ± 0.38 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.69 ± 0.34 | |
| Basal Part of Pons | 4.94 ± 0.25 | |
| Cerebellar Cortex | 4.87 ± 0.49 | |
| Cerebellar Nuclei | 4.48 ± 0.42 | |
| Claustrum | 4.9 ± 0.43 | |
| Epithalamus | 5.02 ± 0.46 | |
| Frontal Lobe | 4.7 ± 0.43 | |
| Globus Pallidus | 4.78 ± 0.34 | |
| Hypothalamus | 4.46 ± 0.55 | |
| Insula | 4.6 ± 0.49 | |
| Limbic Lobe | 4.83 ± 0.43 | |
| Mesencephalon | 4.79 ± 0.41 | |
| Myelencephalon | 4.73 ± 0.46 | |
| Occipital Lobe | 4.88 ± 0.43 | |
| Parietal Lobe | 4.71 ± 0.35 | |
| Pontine Tegmentum | 4.62 ± 0.53 | |
| Striatum | 4.47 ± 0.31 | |
| Subthalamus | 4.08 ± 0.06 | |
| Temporal Lobe | 4.75 ± 0.41 | |
| Thalamus | 4.74 ± 0.41 | |
| White Matter | 4.99 ± 0.35 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00011493 | 15 | 426 | 440 | SLPCQVYVNHGENLK | Peptide Atlas |