AutismKB 2.0

Annotation Detail for ZNF239


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Basic Information Top
Gene Symbol:ZNF239 ( HOK-2,MOK2 )
Gene Full Name: zinc finger protein 239
Band: 10q11.22-q11.23
Quick LinksEntrez ID:8187; OMIM: 601069; Uniprot ID:ZN239_HUMAN; ENSEMBL ID: ENSG00000196793; HGNC ID: 13031
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus8 / 56401214
neonate0 / 310970 
infant0 / 236200 
juvenile2 / 5555635
adult25 / 193912112
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor4 / 26384515
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal44 / 336030713
ovarian tumor1 / 7668213
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS9 / 12568071
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow0 / 488010 
brain22 / 110098919
cervix3 / 4817162
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye0 / 2110540 
heart1 / 8962611
intestine2 / 2344728
kidney2 / 2117779
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary1 / 1020519
pancreas7 / 21481232
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate2 / 18934510
salivary gland0 / 201550 
skin0 / 2105740 
spleen3 / 5395255
stomach1 / 9661910
testis6 / 33044218
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus5 / 23287821
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206261_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.2
Adipocyte4.25
AdrenalCortex4.4
Adrenalgland3.65
Amygdala4.55
Appendix4.25
AtrioventricularNode3.35
BDCA4+_DentriticCells4.6
Bonemarrow4.2
BronchialEpithelialCells4.2
CD105+_Endothelial4.35
CD14+_Monocytes4.5
CD19+_BCells(neg._sel.)4.55
CD33+_Myeloid5.5
CD34+5.5
CD4+_Tcells4.65
CD56+_NKCells5
CD71+_EarlyErythroid3.95
CD8+_Tcells4.15
CardiacMyocytes5.45
Caudatenucleus3.8
Cerebellum3.45
CerebellumPeduncles4.8
CiliaryGanglion3.3
CingulateCortex4.4
Colorectaladenocarcinoma4.3
DorsalRootGanglion3.75
FetalThyroid4.15
Fetalbrain5.2
Fetalliver3.7
Fetallung3.6
GlobusPallidus3.15
Heart5.65
Hypothalamus4.7
Kidney3.45
Leukemia_chronicMyelogenousK-5623.85
Leukemia_promyelocytic-HL-603.75
Leukemialymphoblastic(MOLT-4)3.45
Liver5.6
Lung4.7
Lymphnode3.75
Lymphoma_burkitts(Daudi)5.45
Lymphoma_burkitts(Raji)6
MedullaOblongata3.95
OccipitalLobe3.85
OlfactoryBulb3.4
Ovary3.3
Pancreas3.4
PancreaticIslet4.6
ParietalLobe4.5
Pituitary5
Placenta4.4
Pons4
PrefrontalCortex5.45
Prostate5
Salivarygland3.9
SkeletalMuscle5
Skin3.5
SmoothMuscle4.85
Spinalcord4.55
SubthalamicNucleus3.9
SuperiorCervicalGanglion4.9
TemporalLobe3.85
Testis3.7
TestisGermCell4.6
TestisIntersitial3.65
TestisLeydigCell4.85
TestisSeminiferousTubule7.2
Thalamus4.4
Thymus3.4
Thyroid5.45
Tongue4.2
Tonsil4.15
Trachea3.6
TrigeminalGanglion4.2
Uterus3.65
UterusCorpus3.8
WholeBlood4.75
Wholebrain3.75
colon4.3
pineal_day5.88
pineal_night5.22
retina5.2
small_intestine4.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5200_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.1 ± 0.72
Basal Forebrain2.46 ± 0.29
Basal Part of Pons2.4 ± 0.31
Cerebellar Cortex2.75 ± 0.67
Cerebellar Nuclei2.76 ± 0.63
Claustrum3.1 ± 0.65
Epithalamus2.39 ± 0.65
Frontal Lobe2.56 ± 0.7
Globus Pallidus2.51 ± 0.79
Hypothalamus2.53 ± 0.76
Insula2.59 ± 0.54
Limbic Lobe2.81 ± 0.61
Mesencephalon2.87 ± 0.69
Myelencephalon2.68 ± 0.66
Occipital Lobe2.67 ± 0.8
Parietal Lobe2.76 ± 0.69
Pontine Tegmentum2.71 ± 0.64
Striatum2.61 ± 0.68
Subthalamus2.9 ± 0.82
Temporal Lobe2.77 ± 0.63
Thalamus2.57 ± 0.66
White Matter2.61 ± 0.44
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Zfp239CBCerebellum0
0
Zfp239CTXCerebral cortex0
0
Zfp239HIPHippocampal region0
0
Zfp239HPFHippocampal formation0
0
Zfp239HYHypothalamus0
0
Zfp239LSXLateral septal complex0
0
Zfp239MBMidbrain0
0
Zfp239MYMedulla0
0
Zfp239OLFOlfactory bulb0
0
Zfp239PPons0
0
Zfp239PALPallidum0
0
Zfp239RHPRetrohippocampal region0
0
Zfp239sAMYStriatum-like amygdalar nuclei0
0
Zfp239STRStriatum0
0
Zfp239STRdStriatum dorsal region0
0
Zfp239STRvStriatum ventral region0
0
Zfp239THThalamus0
0
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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