Annotation Detail for FAHD1
Basic Information Top
| Gene Symbol: | FAHD1 ( C16orf36,DKFZp566J2046,MGC74876,YISKL ) |
|---|---|
| Gene Full Name: | fumarylacetoacetate hydrolase domain containing 1 |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:81889; OMIM: NA; Uniprot ID:FAHD1_HUMAN; ENSEMBL ID: ENSG00000180185; HGNC ID: 14169 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.513265
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 17 / 564012 | 30 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 67 / 1939121 | 34 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 |  |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 9 / 106883 | 84 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 122 / 3360307 | 36 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 5 / 46356 | 107 | |
| skin tumor | 18 / 124949 | 144 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 5 / 33197 | 150 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 39 / 1100989 | 35 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 9 / 211054 | 42 | |
| heart | 3 / 89626 | 33 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 8 / 336974 | 23 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 19 / 153271 | 123 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 1 / 107715 | 9 |  |
| nerve | 1 / 15768 | 63 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 18 / 280825 | 64 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 22 / 210574 | 104 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 5 / 96619 | 51 | |
| testis | 5 / 330442 | 15 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: CUST_8595_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.86 ± 0.64 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.95 ± 0.15 | |
| Basal Part of Pons | 8.5 ± 0.29 | |
| Cerebellar Cortex | 8.18 ± 0.22 | |
| Cerebellar Nuclei | 8.4 ± 0.39 | |
| Claustrum | 8.32 ± 0.2 | |
| Epithalamus | 7.95 ± 0.27 | |
| Frontal Lobe | 8.43 ± 0.38 | |
| Globus Pallidus | 7.87 ± 0.43 | |
| Hypothalamus | 8.33 ± 0.31 | |
| Insula | 8.46 ± 0.17 | |
| Limbic Lobe | 8.41 ± 0.45 | |
| Mesencephalon | 8.16 ± 0.35 | |
| Myelencephalon | 8.22 ± 0.44 | |
| Occipital Lobe | 8.06 ± 0.43 | |
| Parietal Lobe | 8.32 ± 0.3 | |
| Pontine Tegmentum | 8.26 ± 0.35 | |
| Striatum | 7.58 ± 0.47 | |
| Subthalamus | 8.47 ± 0.03 | |
| Temporal Lobe | 8.41 ± 0.36 | |
| Thalamus | 8.23 ± 0.3 | |
| White Matter | 7.94 ± 0.35 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Fahd1 | CB | Cerebellum | 12.02 | |
| 15.47 | | |||
| Fahd1 | CTX | Cerebral cortex | 9 | |
| 7.41 | | |||
| Fahd1 | HIP | Hippocampal region | 16.88 | |
| 17.46 | | |||
| Fahd1 | HPF | Hippocampal formation | 17.89 | |
| 17.37 | | |||
| Fahd1 | HY | Hypothalamus | 4.15 | |
| 3.44 | | |||
| Fahd1 | LSX | Lateral septal complex | 0.16 | |
| 0.09 | | |||
| Fahd1 | MB | Midbrain | 1.69 | |
| 2.46 | | |||
| Fahd1 | MY | Medulla | 7.03 | |
| 8.92 | | |||
| Fahd1 | OLF | Olfactory bulb | 26.88 | |
| 24.32 | | |||
| Fahd1 | P | Pons | 7.48 | |
| 9.7 | | |||
| Fahd1 | PAL | Pallidum | 7.06 | |
| 7.53 | | |||
| Fahd1 | RHP | Retrohippocampal region | 20.38 | |
| 17.85 | | |||
| Fahd1 | sAMY | Striatum-like amygdalar nuclei | 13.88 | |
| 11.01 | | |||
| Fahd1 | STR | Striatum | 4.93 | |
| 4.13 | | |||
| Fahd1 | STRd | Striatum dorsal region | 1.97 | |
| 1.74 | | |||
| Fahd1 | STRv | Striatum ventral region | 12.13 | |
| 9.44 | | |||
| Fahd1 | TH | Thalamus | 3.07 | |
| 2.73 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| FAHD1_HUMAN_0 | 0 | 0 | 0 | IITLEEGDIILTGTPK | PRIDE |
| FAHD1_HUMAN_123 | 14 | 123 | 136 | SFTASCPVSAFVPK | PRIDE |
| FAHD1_HUMAN_178 | 16 | 178 | 193 | IITLEEGDIILTGTPK | PRIDE |
| FAHD1_HUMAN_66 | 14 | 66 | 79 | NLHHELELGVVMGK | PRIDE |
| FAHD1_HUMAN_67 | 14 | 67 | 80 | NLHHELELGVVMGK | PRIDE |
| PAp00007092 | 14 | 124 | 137 | SFTASCPVSAFVPK | Peptide Atlas |