AutismKB 2.0

Annotation Detail for QTRT1


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Basic Information Top
Gene Symbol:QTRT1 ( FP3235,TGT )
Gene Full Name: queuine tRNA-ribosyltransferase 1
Band: 19p13.3
Quick LinksEntrez ID:81890; OMIM: 609615; Uniprot ID:TGT_HUMAN; ENSEMBL ID: ENSG00000213339; HGNC ID: 23797
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst4 / 6231964
fetus12 / 56401221
neonate1 / 3109732
infant0 / 236200 
juvenile5 / 5555689
adult83 / 193912142
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma2 / 17475114
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor3 / 11424626
esophageal tumor1 / 1729057
gastrointestinal tumor8 / 11936967
germ cell tumor5 / 26384518
glioma9 / 10688384
head and neck tumor2 / 13630214
kidney tumor4 / 6895958
leukemia2 / 9584220
liver tumor4 / 9635941
lung tumor8 / 10312777
lymphoma9 / 71755125
non-neoplasia4 / 9725041
normal132 / 336030739
ovarian tumor2 / 7668226
pancreatic tumor9 / 10461686
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer2 / 10268019
retinoblastoma2 / 4635643
skin tumor3 / 12494924
soft tissue/muscle tissue tumor7 / 12519155
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites7 / 40015174
bladder1 / 2975733
blood2 / 12347816
bone3 / 7165541
bone marrow0 / 488010 
brain70 / 110098963
cervix3 / 4817162
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue13 / 21572260
esophagus1 / 2020949
eye8 / 21105437
heart1 / 8962611
intestine12 / 23447251
kidney6 / 21177728
larynx2 / 2414582
liver4 / 20774319
lung11 / 33697432
lymph9 / 44270203
lymph node0 / 916100 
mammary gland1 / 1532716
mouth0 / 670520 
muscle5 / 10771546
nerve4 / 15768253
ovary4 / 10205139
pancreas18 / 21481283
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta8 / 28082528
prostate5 / 18934526
salivary gland1 / 2015549
skin4 / 21057418
spleen2 / 5395237
stomach0 / 966190 
testis9 / 33044227
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus13 / 23287855
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 221270_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts17.5
Adipocyte6.15
AdrenalCortex7.45
Adrenalgland4.65
Amygdala9
Appendix5.1
AtrioventricularNode3.05
BDCA4+_DentriticCells8.5
Bonemarrow5
BronchialEpithelialCells4.55
CD105+_Endothelial9.95
CD14+_Monocytes4.9
CD19+_BCells(neg._sel.)7.85
CD33+_Myeloid6.6
CD34+18.25
CD4+_Tcells12.7
CD56+_NKCells6.8
CD71+_EarlyErythroid5.05
CD8+_Tcells11.35
CardiacMyocytes6.8
Caudatenucleus5.05
Cerebellum4.55
CerebellumPeduncles6.3
CiliaryGanglion3.75
CingulateCortex6.85
Colorectaladenocarcinoma5.4
DorsalRootGanglion3.85
FetalThyroid6.35
Fetalbrain7.85
Fetalliver4.8
Fetallung5
GlobusPallidus3.95
Heart12.45
Hypothalamus6.75
Kidney4.35
Leukemia_chronicMyelogenousK-5628.2
Leukemia_promyelocytic-HL-605.7
Leukemialymphoblastic(MOLT-4)2.95
Liver8.2
Lung8.4
Lymphnode4.8
Lymphoma_burkitts(Daudi)6.65
Lymphoma_burkitts(Raji)14.25
MedullaOblongata5.2
OccipitalLobe4.35
OlfactoryBulb3.35
Ovary3.65
Pancreas6.7
PancreaticIslet10
ParietalLobe5.35
Pituitary8.5
Placenta3.4
Pons4.8
PrefrontalCortex7.15
Prostate8.4
Salivarygland3.8
SkeletalMuscle6.05
Skin3.8
SmoothMuscle5.1
Spinalcord6
SubthalamicNucleus5.45
SuperiorCervicalGanglion5.25
TemporalLobe5.05
Testis4.3
TestisGermCell4.75
TestisIntersitial4.55
TestisLeydigCell4.35
TestisSeminiferousTubule4.85
Thalamus5.65
Thymus4.05
Thyroid36.1
Tongue4.75
Tonsil5.45
Trachea4.65
TrigeminalGanglion3.85
Uterus6.95
UterusCorpus4.45
WholeBlood5
Wholebrain7
colon5.25
pineal_day16.72
pineal_night8.72
retina6.6
small_intestine5.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_9670_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.49 ± 0.29
Basal Forebrain4.27 ± 0.16
Basal Part of Pons4.32 ± 0.47
Cerebellar Cortex4.38 ± 0.67
Cerebellar Nuclei3.89 ± 0.48
Claustrum4.19 ± 0.84
Epithalamus4.15 ± 0.51
Frontal Lobe4.19 ± 0.56
Globus Pallidus4.51 ± 0.94
Hypothalamus4.03 ± 0.44
Insula4 ± 0.32
Limbic Lobe4.35 ± 0.53
Mesencephalon4.29 ± 0.51
Myelencephalon4.22 ± 0.55
Occipital Lobe4.23 ± 0.39
Parietal Lobe4.23 ± 0.48
Pontine Tegmentum4.21 ± 0.69
Striatum4.18 ± 0.58
Subthalamus3.83 ± 0.34
Temporal Lobe4.34 ± 0.46
Thalamus4.06 ± 0.6
White Matter4.7 ± 0.29
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Qtrt1CBCerebellum1.33
1.5
Qtrt1CTXCerebral cortex4.84
2.8
Qtrt1HIPHippocampal region9.49
7.58
Qtrt1HPFHippocampal formation9.01
6.58
Qtrt1HYHypothalamus0.2
0.21
Qtrt1LSXLateral septal complex0.79
0.67
Qtrt1MBMidbrain0.56
0.54
Qtrt1MYMedulla2.8
2.45
Qtrt1OLFOlfactory bulb11.21
6.9
Qtrt1PPons0.84
0.75
Qtrt1PALPallidum0.45
0.28
Qtrt1RHPRetrohippocampal region8.37
5.3
Qtrt1sAMYStriatum-like amygdalar nuclei2.67
1.68
Qtrt1STRStriatum2.19
1.43
Qtrt1STRdStriatum dorsal region2.66
1.77
Qtrt1STRvStriatum ventral region0.78
0.49
Qtrt1THThalamus3.09
2.29
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00003722 20 69 88 ICLGNTYHLGLRPGPELIQK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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