Annotation Detail for CAPS
Basic Information Top
| Gene Symbol: | CAPS ( CAPS1,MGC126562 ) |
|---|---|
| Gene Full Name: | calcyphosine |
| Band: | 19p13.3 |
| Quick Links | Entrez ID:828; OMIM: 114212; Uniprot ID:CAYP1_HUMAN; ENSEMBL ID: ENSG00000105519; HGNC ID: 1487 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.584744
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 11 / 564012 | 19 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 70 / 1939121 | 36 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 82 / 3360307 | 24 | |
| ovarian tumor | 4 / 76682 | 52 |  |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 18 / 124949 | 144 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 36 / 90257 | 398 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 12 / 1100989 | 10 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 13 / 211054 | 61 | |
| heart | 1 / 89626 | 11 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 22 / 336974 | 65 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 10 / 280825 | 35 | |
| prostate | 12 / 189345 | 63 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 18 / 210574 | 85 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 40 / 232878 | 171 | |
| vascular | 0 / 51780 | 0 |
- Probe name: A_24_P313993
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.96 ± 0.62 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.9 ± 0.6 | |
| Basal Part of Pons | 4.05 ± 0.75 | |
| Cerebellar Cortex | 3.81 ± 0.45 | |
| Cerebellar Nuclei | 4.06 ± 0.67 | |
| Claustrum | 3.82 ± 0.96 | |
| Epithalamus | 7.46 ± 1.28 | |
| Frontal Lobe | 4.04 ± 1.04 | |
| Globus Pallidus | 4.85 ± 0.44 | |
| Hypothalamus | 4.33 ± 1.25 | |
| Insula | 3.85 ± 0.58 | |
| Limbic Lobe | 3.82 ± 0.79 | |
| Mesencephalon | 4.39 ± 0.95 | |
| Myelencephalon | 4.25 ± 1.07 | |
| Occipital Lobe | 4.05 ± 0.82 | |
| Parietal Lobe | 4.06 ± 0.72 | |
| Pontine Tegmentum | 3.96 ± 0.72 | |
| Striatum | 4.96 ± 1.58 | |
| Subthalamus | 3.77 ± 0.02 | |
| Temporal Lobe | 4.04 ± 0.6 | |
| Thalamus | 4.09 ± 0.62 | |
| White Matter | 6.25 ± 0.91 | |
Mouse Brain ISH 