AutismKB 2.0

Annotation Detail for HIST1H3G


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Basic Information Top
Gene Symbol:HIST1H3G ( H3/h,H3FH,HIST1H3A,HIST1H3B,HIST1H3C,HIST1H3D,HIST1H3E,HIST1H3F,HIST1H3H,HIST1H3I,HIST1H3J )
Gene Full Name: histone cluster 1, H3g
Band: 6p22.2
Quick LinksEntrez ID:8355; OMIM: 602815; Uniprot ID:H31_HUMAN; ENSEMBL ID: ENSG00000248541; HGNC ID: 4772
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult0 / 19391210 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal1 / 33603070 
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney1 / 2117774
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin1 / 2105744
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214509_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.05
Adipocyte4.75
AdrenalCortex5.9
Adrenalgland4.5
Amygdala5
Appendix5
AtrioventricularNode4.6
BDCA4+_DentriticCells5.15
Bonemarrow5.2
BronchialEpithelialCells4.75
CD105+_Endothelial4.75
CD14+_Monocytes5.15
CD19+_BCells(neg._sel.)5.2
CD33+_Myeloid6.2
CD34+6.2
CD4+_Tcells5.3
CD56+_NKCells5.8
CD71+_EarlyErythroid4.8
CD8+_Tcells4.65
CardiacMyocytes10
Caudatenucleus4.45
Cerebellum4
CerebellumPeduncles6.6
CiliaryGanglion3.5
CingulateCortex5.65
Colorectaladenocarcinoma4.95
DorsalRootGanglion4.55
FetalThyroid4.8
Fetalbrain4.9
Fetalliver4.3
Fetallung4.05
GlobusPallidus3.7
Heart6.5
Hypothalamus5.3
Kidney4.4
Leukemia_chronicMyelogenousK-5624.4
Leukemia_promyelocytic-HL-604.35
Leukemialymphoblastic(MOLT-4)4
Liver6.55
Lung5.4
Lymphnode4.25
Lymphoma_burkitts(Daudi)6.3
Lymphoma_burkitts(Raji)7.8
MedullaOblongata4.45
OccipitalLobe4.4
OlfactoryBulb3.9
Ovary3.65
Pancreas5.1
PancreaticIslet5.25
ParietalLobe5.6
Pituitary5.75
Placenta5.1
Pons4.7
PrefrontalCortex6.05
Prostate5.5
Salivarygland4.1
SkeletalMuscle5.75
Skin3.85
SmoothMuscle5.55
Spinalcord5.3
SubthalamicNucleus4.6
SuperiorCervicalGanglion5.6
TemporalLobe4.55
Testis4.15
TestisGermCell4.1
TestisIntersitial4.1
TestisLeydigCell5.05
TestisSeminiferousTubule4.45
Thalamus5.15
Thymus3.9
Thyroid6.15
Tongue5.4
Tonsil4.8
Trachea4.15
TrigeminalGanglion5.25
Uterus4.05
UterusCorpus5.2
WholeBlood5.4
Wholebrain4
colon4.95
pineal_day6.2
pineal_night6.02
retina5.975
small_intestine4.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P42198
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.28 ± 0.47
Basal Forebrain7.76 ± 0.3
Basal Part of Pons6.93 ± 0.32
Cerebellar Cortex7.84 ± 0.21
Cerebellar Nuclei7.72 ± 0.34
Claustrum7.26 ± 0.38
Epithalamus8.02 ± 0.39
Frontal Lobe7.46 ± 0.36
Globus Pallidus7.86 ± 0.38
Hypothalamus7.82 ± 0.33
Insula7.51 ± 0.21
Limbic Lobe7.29 ± 0.26
Mesencephalon7.62 ± 0.31
Myelencephalon7.46 ± 0.37
Occipital Lobe7.34 ± 0.24
Parietal Lobe7.46 ± 0.33
Pontine Tegmentum7.61 ± 0.29
Striatum7.36 ± 0.6
Subthalamus7.61 ± 0.42
Temporal Lobe7.36 ± 0.3
Thalamus7.37 ± 0.29
White Matter8.06 ± 0.43
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
H31_HUMAN_19 8 19 26 QLATKAAR PRIDE
H31_HUMAN_19 9 19 27 KQLATKAAR PRIDE
H31_HUMAN_41 9 41 49 YRPGTVALR PRIDE
H31_HUMAN_57 7 57 63 STELLIR PRIDE
H31_HUMAN_64 6 64 69 KLPFQR PRIDE
H31_HUMAN_73 11 73 83 EIAQDFKTDLR PRIDE
H31_HUMAN_74 11 74 84 EIAQDFKTDLR PRIDE
PAp00002372 12 105 116 FEDTNLCAIHAK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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