Annotation Detail for TMUB1
Basic Information Top
| Gene Symbol: | TMUB1 ( C7orf21,MGC5442 ) |
|---|---|
| Gene Full Name: | transmembrane and ubiquitin-like domain containing 1 |
| Band: | 7q36.1 |
| Quick Links | Entrez ID:83590; OMIM: NA; Uniprot ID:TMUB1_HUMAN; ENSEMBL ID: ENSG00000164897; HGNC ID: 21709 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.726215
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 5 / 564012 | 8 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 95 / 1939121 | 48 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 11 / 114246 | 96 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 19 / 119369 | 159 | |
| germ cell tumor | 17 / 263845 | 64 | |
| glioma | 13 / 106883 | 121 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 8 / 103127 | 77 | |
| lymphoma | 8 / 71755 | 111 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 102 / 3360307 | 30 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 9 / 104616 | 86 | |
| primitive neuroectodermal tumor of the CNS | 12 / 125680 | 95 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 6 / 40015 | 149 | |
| bladder | 0 / 29757 | 0 | |
| blood | 4 / 123478 | 32 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 29 / 1100989 | 26 | |
| cervix | 6 / 48171 | 124 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 12 / 211054 | 56 | |
| heart | 3 / 89626 | 33 | |
| intestine | 25 / 234472 | 106 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 2 / 24145 | 82 | |
| liver | 2 / 207743 | 9 | |
| lung | 16 / 336974 | 47 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 14 / 91610 | 152 | |
| mammary gland | 9 / 153271 | 58 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 22 / 214812 | 102 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 15 / 280825 | 53 | |
| prostate | 10 / 189345 | 52 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 5 / 210574 | 23 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 4 / 96619 | 41 | |
| testis | 2 / 330442 | 6 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P354998
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.12 ± 0.3 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.19 ± 0.32 | |
| Basal Part of Pons | 6.19 ± 0.37 | |
| Cerebellar Cortex | 5.99 ± 0.32 | |
| Cerebellar Nuclei | 6.23 ± 0.28 | |
| Claustrum | 6.03 ± 0.5 | |
| Epithalamus | 5.9 ± 0.33 | |
| Frontal Lobe | 6.23 ± 0.39 | |
| Globus Pallidus | 6.14 ± 0.34 | |
| Hypothalamus | 6.08 ± 0.2 | |
| Insula | 6.08 ± 0.34 | |
| Limbic Lobe | 6.07 ± 0.39 | |
| Mesencephalon | 6.12 ± 0.37 | |
| Myelencephalon | 6.15 ± 0.34 | |
| Occipital Lobe | 5.97 ± 0.3 | |
| Parietal Lobe | 6.13 ± 0.32 | |
| Pontine Tegmentum | 5.99 ± 0.35 | |
| Striatum | 6.11 ± 0.29 | |
| Subthalamus | 5.94 ± 0.39 | |
| Temporal Lobe | 6.13 ± 0.32 | |
| Thalamus | 6.29 ± 0.25 | |
| White Matter | 5.95 ± 0.28 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tmub1 | CB | Cerebellum | 3.72 | |
| 4.59 | | |||
| Tmub1 | CTX | Cerebral cortex | 1.01 | |
| 1.1 | | |||
| Tmub1 | HIP | Hippocampal region | 3.61 | |
| 3.73 | | |||
| Tmub1 | HPF | Hippocampal formation | 2.86 | |
| 2.8 | | |||
| Tmub1 | HY | Hypothalamus | 2.49 | |
| 2.94 | | |||
| Tmub1 | LSX | Lateral septal complex | 0.51 | |
| 0.64 | | |||
| Tmub1 | MB | Midbrain | 1.5 | |
| 3.14 | | |||
| Tmub1 | MY | Medulla | 4.36 | |
| 6.75 | | |||
| Tmub1 | OLF | Olfactory bulb | 12.22 | |
| 11.91 | | |||
| Tmub1 | P | Pons | 4.99 | |
| 8.9 | | |||
| Tmub1 | PAL | Pallidum | 2.2 | |
| 2.79 | | |||
| Tmub1 | RHP | Retrohippocampal region | 1.26 | |
| 1.16 | | |||
| Tmub1 | sAMY | Striatum-like amygdalar nuclei | 2.17 | |
| 2.31 | | |||
| Tmub1 | STR | Striatum | 1.38 | |
| 1.45 | | |||
| Tmub1 | STRd | Striatum dorsal region | 0.73 | |
| 0.87 | | |||
| Tmub1 | STRv | Striatum ventral region | 3.67 | |
| 3.25 | | |||
| Tmub1 | TH | Thalamus | 1.13 | |
| 1.25 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00003512 | 31 | 76 | 106 | HRGQAAQPEPSTGFTATPPAPDSPQEPLVLR | Peptide Atlas |