Annotation Detail for RASSF5
Basic Information Top
| Gene Symbol: | RASSF5 ( MGC10823,MGC17344,Maxp1,NORE1,NORE1A,NORE1B,RAPL,RASSF3 ) |
|---|---|
| Gene Full Name: | Ras association (RalGDS/AF-6) domain family member 5 |
| Band: | 1q32.1 |
| Quick Links | Entrez ID:83593; OMIM: 607020; Uniprot ID:RASF5_HUMAN; ENSEMBL ID: ENSG00000136653; HGNC ID: 17609 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.497579
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 24 / 564012 | 42 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 75 / 1939121 | 38 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 2 / 34366 | 58 |  |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 8 / 136302 | 58 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 10 / 95842 | 104 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 151 / 3360307 | 44 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 13 / 123478 | 105 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 28 / 1100989 | 25 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 7 / 149255 | 46 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 3 / 211054 | 14 | |
| heart | 1 / 89626 | 11 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 20 / 336974 | 59 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 5 / 67052 | 74 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 13 / 214812 | 60 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 5 / 41328 | 120 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 14 / 53952 | 259 |  |
| stomach | 2 / 96619 | 20 | |
| testis | 3 / 330442 | 9 | |
| thymus | 26 / 81131 | 320 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 2 / 16999 | 117 | |
| trachea | 9 / 52413 | 171 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 7 / 232878 | 30 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P336584
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.74 ± 0.66 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.7 ± 0.37 | |
| Basal Part of Pons | 5.62 ± 0.43 | |
| Cerebellar Cortex | 4.45 ± 0.54 | |
| Cerebellar Nuclei | 4.29 ± 0.63 | |
| Claustrum | 4.66 ± 0.66 | |
| Epithalamus | 4.35 ± 0.59 | |
| Frontal Lobe | 5.14 ± 0.63 | |
| Globus Pallidus | 4.23 ± 0.94 | |
| Hypothalamus | 3.98 ± 0.79 | |
| Insula | 4.95 ± 0.31 | |
| Limbic Lobe | 5.22 ± 0.65 | |
| Mesencephalon | 4.74 ± 0.87 | |
| Myelencephalon | 4.93 ± 0.77 | |
| Occipital Lobe | 5.52 ± 0.6 | |
| Parietal Lobe | 5.2 ± 0.64 | |
| Pontine Tegmentum | 4.75 ± 0.66 | |
| Striatum | 3.65 ± 1.27 | |
| Subthalamus | 4.59 ± 0.36 | |
| Temporal Lobe | 5.04 ± 0.54 | |
| Thalamus | 5.6 ± 0.56 | |
| White Matter | 3.29 ± 0.84 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Rassf5 | CB | Cerebellum | 7.33 | |
| 9.38 | | |||
| Rassf5 | CTX | Cerebral cortex | 17.08 | |
| 12.66 | | |||
| Rassf5 | HIP | Hippocampal region | 8.3 | |
| 8.29 | | |||
| Rassf5 | HPF | Hippocampal formation | 7.33 | |
| 6.76 | | |||
| Rassf5 | HY | Hypothalamus | 3.23 | |
| 2.81 | | |||
| Rassf5 | LSX | Lateral septal complex | 0.36 | |
| 0.31 | | |||
| Rassf5 | MB | Midbrain | 9.76 | |
| 10.75 | | |||
| Rassf5 | MY | Medulla | 22.11 | |
| 26.86 | | |||
| Rassf5 | OLF | Olfactory bulb | 5.52 | |
| 4.24 | | |||
| Rassf5 | P | Pons | 14.95 | |
| 19.03 | | |||
| Rassf5 | PAL | Pallidum | 6.27 | |
| 5.88 | | |||
| Rassf5 | RHP | Retrohippocampal region | 6.09 | |
| 4.97 | | |||
| Rassf5 | sAMY | Striatum-like amygdalar nuclei | 3.47 | |
| 2.41 | | |||
| Rassf5 | STR | Striatum | 2.25 | |
| 1.87 | | |||
| Rassf5 | STRd | Striatum dorsal region | 2.27 | |
| 2.01 | | |||
| Rassf5 | STRv | Striatum ventral region | 2.72 | |
| 2.11 | | |||
| Rassf5 | TH | Thalamus | 8.56 | |
| 8.32 | |