Annotation Detail for C22orf13
Basic Information Top
| Gene Symbol: | C22orf13 ( LLN4,MGC1842 ) |
|---|---|
| Gene Full Name: | chromosome 22 open reading frame 13 |
| Band: | 22q11.2 |
| Quick Links | Entrez ID:83606; OMIM: NA; Uniprot ID:CV013_HUMAN; ENSEMBL ID: ENSG00000138867; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.9850
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 30 / 564012 | 53 | |
| neonate | 2 / 31097 | 64 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 80 / 1939121 | 41 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 13 / 82823 | 156 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 39 / 263845 | 147 | |
| glioma | 8 / 106883 | 74 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 6 / 68959 | 87 | |
| leukemia | 12 / 95842 | 125 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 15 / 71755 | 209 |  |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 138 / 3360307 | 41 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 7 / 102680 | 68 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 17 / 124949 | 136 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 5 / 40015 | 124 | |
| bladder | 0 / 29757 | 0 | |
| blood | 9 / 123478 | 72 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 39 / 1100989 | 35 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 8 / 149255 | 53 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 4 / 89626 | 44 | |
| intestine | 17 / 234472 | 72 | |
| kidney | 18 / 211777 | 84 | |
| larynx | 0 / 24145 | 0 | |
| liver | 12 / 207743 | 57 | |
| lung | 18 / 336974 | 53 | |
| lymph | 9 / 44270 | 203 | |
| lymph node | 8 / 91610 | 87 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 5 / 67052 | 74 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 9 / 102051 | 88 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 41 / 280825 | 145 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 23 / 210574 | 109 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 1 / 96619 | 10 |  |
| testis | 18 / 330442 | 54 | |
| thymus | 9 / 81131 | 110 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 0 / 51780 | 0 |
- Probe name: A_24_P331373
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.33 ± 1.18 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.87 ± 0.36 | |
| Basal Part of Pons | 2.57 ± 0.48 | |
| Cerebellar Cortex | 2.86 ± 0.82 | |
| Cerebellar Nuclei | 3.15 ± 0.71 | |
| Claustrum | 3.44 ± 0.96 | |
| Epithalamus | 2.7 ± 0.89 | |
| Frontal Lobe | 2.85 ± 0.92 | |
| Globus Pallidus | 3.52 ± 0.66 | |
| Hypothalamus | 2.91 ± 0.86 | |
| Insula | 2.52 ± 0.64 | |
| Limbic Lobe | 2.88 ± 0.82 | |
| Mesencephalon | 3.15 ± 0.88 | |
| Myelencephalon | 2.91 ± 0.76 | |
| Occipital Lobe | 3.15 ± 0.87 | |
| Parietal Lobe | 2.98 ± 0.86 | |
| Pontine Tegmentum | 3.02 ± 0.94 | |
| Striatum | 3.24 ± 0.89 | |
| Subthalamus | 3.31 ± 0.71 | |
| Temporal Lobe | 2.75 ± 0.77 | |
| Thalamus | 2.82 ± 0.79 | |
| White Matter | 3.71 ± 0.44 | |
Mouse Brain ISH 