Annotation Detail for SELO
Basic Information Top
| Gene Symbol: | SELO ( MGC131879 ) |
|---|---|
| Gene Full Name: | - |
| Band: | 22q13.33 |
| Quick Links | Entrez ID:83642; OMIM: 607917; Uniprot ID:SELO_HUMAN; ENSEMBL ID: ENSG00000073169; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.365405
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 6 / 564012 | 10 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 62 / 1939121 | 31 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 1 / 17290 | 57 |  |
| gastrointestinal tumor | 8 / 119369 | 67 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 5 / 96359 | 51 | |
| lung tumor | 6 / 103127 | 58 | |
| lymphoma | 10 / 71755 | 139 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 67 / 3360307 | 19 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 19 / 125680 | 151 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 8 / 40015 | 199 | |
| bladder | 0 / 29757 | 0 | |
| blood | 8 / 123478 | 64 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 19 / 1100989 | 17 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 3 / 211054 | 14 | |
| heart | 2 / 89626 | 22 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 6 / 207743 | 28 | |
| lung | 12 / 336974 | 35 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 5 / 210574 | 23 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 3 / 330442 | 9 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P49322
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.46 ± 0.76 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.34 ± 0.44 | |
| Basal Part of Pons | 3.62 ± 0.64 | |
| Cerebellar Cortex | 4.08 ± 0.43 | |
| Cerebellar Nuclei | 3.34 ± 0.61 | |
| Claustrum | 3.41 ± 0.76 | |
| Epithalamus | 3.38 ± 0.52 | |
| Frontal Lobe | 3.57 ± 0.58 | |
| Globus Pallidus | 3.06 ± 0.45 | |
| Hypothalamus | 3.23 ± 0.36 | |
| Insula | 3.95 ± 1.09 | |
| Limbic Lobe | 3.54 ± 0.63 | |
| Mesencephalon | 3.49 ± 0.65 | |
| Myelencephalon | 3.53 ± 0.63 | |
| Occipital Lobe | 3.37 ± 0.56 | |
| Parietal Lobe | 3.53 ± 0.57 | |
| Pontine Tegmentum | 3.36 ± 0.58 | |
| Striatum | 3.08 ± 0.64 | |
| Subthalamus | 3.17 ± 0.89 | |
| Temporal Lobe | 3.55 ± 0.56 | |
| Thalamus | 3.51 ± 0.49 | |
| White Matter | 3.8 ± 0.42 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1300018J18Rik | CB | Cerebellum | 7.67 | |
| 7.93 | | |||
| 1300018J18Rik | CTX | Cerebral cortex | 9.27 | |
| 6.36 | | |||
| 1300018J18Rik | HIP | Hippocampal region | 9.38 | |
| 8.11 | | |||
| 1300018J18Rik | HPF | Hippocampal formation | 10.13 | |
| 8.3 | | |||
| 1300018J18Rik | HY | Hypothalamus | 3.51 | |
| 2.75 | | |||
| 1300018J18Rik | LSX | Lateral septal complex | 0.68 | |
| 0.5 | | |||
| 1300018J18Rik | MB | Midbrain | 2.43 | |
| 2.76 | | |||
| 1300018J18Rik | MY | Medulla | 9.85 | |
| 11.71 | | |||
| 1300018J18Rik | OLF | Olfactory bulb | 17.58 | |
| 12.47 | | |||
| 1300018J18Rik | P | Pons | 4.58 | |
| 5.7 | | |||
| 1300018J18Rik | PAL | Pallidum | 7.75 | |
| 9.13 | | |||
| 1300018J18Rik | RHP | Retrohippocampal region | 11.51 | |
| 8.67 | | |||
| 1300018J18Rik | sAMY | Striatum-like amygdalar nuclei | 9.31 | |
| 6.02 | | |||
| 1300018J18Rik | STR | Striatum | 3.91 | |
| 2.73 | | |||
| 1300018J18Rik | STRd | Striatum dorsal region | 3.13 | |
| 2.3 | | |||
| 1300018J18Rik | STRv | Striatum ventral region | 4.4 | |
| 2.86 | | |||
| 1300018J18Rik | TH | Thalamus | 4.15 | |
| 3.59 | |