Annotation Detail for RAB34
Basic Information Top
| Gene Symbol: | RAB34 ( RAB39,RAH ) |
|---|---|
| Gene Full Name: | RAB34, member RAS oncogene family |
| Band: | 17q11.2 |
| Quick Links | Entrez ID:83871; OMIM: 610917; Uniprot ID:RAB34_HUMAN; ENSEMBL ID: ENSG00000109113; HGNC ID: 16519 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.301853
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 8 / 70761 | 113 |  |
| blastocyst | 13 / 62319 | 208 |  |
| fetus | 51 / 564012 | 90 | |
| neonate | 6 / 31097 | 192 | |
| infant | 3 / 23620 | 127 | |
| juvenile | 2 / 55556 | 35 |  |
| adult | 142 / 1939121 | 73 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 6 / 34366 | 174 | |
| chondrosarcoma | 12 / 82823 | 144 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 6 / 17290 | 347 | |
| gastrointestinal tumor | 9 / 119369 | 75 | |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 12 / 136302 | 88 | |
| kidney tumor | 18 / 68959 | 261 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 15 / 96359 | 155 | |
| lung tumor | 19 / 103127 | 184 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 8 / 97250 | 82 | |
| normal | 285 / 3360307 | 84 | |
| ovarian tumor | 10 / 76682 | 130 | |
| pancreatic tumor | 28 / 104616 | 267 | |
| primitive neuroectodermal tumor of the CNS | 8 / 125680 | 63 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 13 / 124949 | 104 | |
| soft tissue/muscle tissue tumor | 14 / 125191 | 111 | |
| uterine tumor | 14 / 90257 | 155 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 4 / 123478 | 32 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 68 / 1100989 | 61 | |
| cervix | 11 / 48171 | 228 | |
| connective tissue | 13 / 149255 | 87 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 31 / 215722 | 143 | |
| esophagus | 6 / 20209 | 296 | |
| eye | 24 / 211054 | 113 | |
| heart | 12 / 89626 | 133 | |
| intestine | 16 / 234472 | 68 | |
| kidney | 30 / 211777 | 141 | |
| larynx | 1 / 24145 | 41 | |
| liver | 26 / 207743 | 125 | |
| lung | 51 / 336974 | 151 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 8 / 107715 | 74 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 15 / 102051 | 146 | |
| pancreas | 28 / 214812 | 130 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 19 / 280825 | 67 | |
| prostate | 21 / 189345 | 110 | |
| salivary gland | 11 / 20155 | 545 | |
| skin | 25 / 210574 | 118 | |
| spleen | 8 / 53952 | 148 | |
| stomach | 8 / 96619 | 82 | |
| testis | 12 / 330442 | 36 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 5 / 13680 | 365 | |
| uterus | 42 / 232878 | 180 | |
| vascular | 0 / 51780 | 0 |
- Probe name: CUST_14575_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.25 ± 0.7 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.14 ± 0.33 | |
| Basal Part of Pons | 2.63 ± 0.68 | |
| Cerebellar Cortex | 2.71 ± 0.65 | |
| Cerebellar Nuclei | 3.03 ± 0.76 | |
| Claustrum | 3.23 ± 0.7 | |
| Epithalamus | 3.15 ± 0.78 | |
| Frontal Lobe | 3.04 ± 0.71 | |
| Globus Pallidus | 3.81 ± 0.7 | |
| Hypothalamus | 2.98 ± 0.41 | |
| Insula | 3.19 ± 0.59 | |
| Limbic Lobe | 2.91 ± 0.77 | |
| Mesencephalon | 3.35 ± 0.73 | |
| Myelencephalon | 3.13 ± 0.68 | |
| Occipital Lobe | 3.22 ± 0.77 | |
| Parietal Lobe | 3.11 ± 0.68 | |
| Pontine Tegmentum | 3.15 ± 0.69 | |
| Striatum | 3.33 ± 0.73 | |
| Subthalamus | 3.11 ± 0.82 | |
| Temporal Lobe | 3.06 ± 0.71 | |
| Thalamus | 3.28 ± 0.7 | |
| White Matter | 2.23 ± 0.31 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00084996 | 11 | 103 | 113 | LQLWDTAGQER | Peptide Atlas |
| RAB34_HUMAN_1 | 8 | 1 | 8 | MNILAPVR | PRIDE |