Annotation Detail for TSPAN10
Basic Information Top
| Gene Symbol: | TSPAN10 ( FLJ39607,OCSP ) |
|---|---|
| Gene Full Name: | tetraspanin 10 |
| Band: | 17q25.3 |
| Quick Links | Entrez ID:83882; OMIM: NA; Uniprot ID:TSN10_HUMAN; ENSEMBL ID: ENSG00000182612; HGNC ID: 29942 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.208219
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 3 / 564012 | 5 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 |  |
| adult | 13 / 1939121 | 6 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 18 / 3360307 | 5 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 22 / 124949 | 176 |  |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 5 / 1100989 | 4 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 22 / 210574 | 104 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P213643
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.39 ± 0.71 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.13 ± 0.43 | |
| Basal Part of Pons | 6.19 ± 0.42 | |
| Cerebellar Cortex | 5.78 ± 0.57 | |
| Cerebellar Nuclei | 6.3 ± 0.32 | |
| Claustrum | 6.48 ± 0.58 | |
| Epithalamus | 5.26 ± 0.68 | |
| Frontal Lobe | 5.98 ± 0.58 | |
| Globus Pallidus | 6.56 ± 0.59 | |
| Hypothalamus | 6.04 ± 0.42 | |
| Insula | 5.84 ± 0.73 | |
| Limbic Lobe | 6.13 ± 0.61 | |
| Mesencephalon | 6.1 ± 0.48 | |
| Myelencephalon | 6.1 ± 0.63 | |
| Occipital Lobe | 6.11 ± 0.64 | |
| Parietal Lobe | 6.07 ± 0.54 | |
| Pontine Tegmentum | 5.91 ± 0.58 | |
| Striatum | 6.27 ± 0.61 | |
| Subthalamus | 5.61 ± 0.78 | |
| Temporal Lobe | 5.95 ± 0.67 | |
| Thalamus | 6.14 ± 0.51 | |
| White Matter | 5.88 ± 0.11 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tspan10 | CB | Cerebellum | 1 | |
| 2.26 | | |||
| Tspan10 | CTX | Cerebral cortex | 3.73 | |
| 2.66 | | |||
| Tspan10 | HIP | Hippocampal region | 6.13 | |
| 6.23 | | |||
| Tspan10 | HPF | Hippocampal formation | 7 | |
| 6.33 | | |||
| Tspan10 | HY | Hypothalamus | 8.77 | |
| 6.43 | | |||
| Tspan10 | LSX | Lateral septal complex | 0.42 | |
| 0.37 | | |||
| Tspan10 | MB | Midbrain | 1.08 | |
| 1.05 | | |||
| Tspan10 | MY | Medulla | 0.26 | |
| 0.58 | | |||
| Tspan10 | OLF | Olfactory bulb | 7.05 | |
| 4.88 | | |||
| Tspan10 | P | Pons | 1.74 | |
| 3.05 | | |||
| Tspan10 | PAL | Pallidum | 4.63 | |
| 3.62 | | |||
| Tspan10 | RHP | Retrohippocampal region | 8.75 | |
| 6.75 | | |||
| Tspan10 | sAMY | Striatum-like amygdalar nuclei | 9.08 | |
| 6.4 | | |||
| Tspan10 | STR | Striatum | 3.75 | |
| 2.75 | | |||
| Tspan10 | STRd | Striatum dorsal region | 2.54 | |
| 1.74 | | |||
| Tspan10 | STRv | Striatum ventral region | 7.09 | |
| 5.36 | | |||
| Tspan10 | TH | Thalamus | 6.13 | |
| 4.43 | |