Annotation Detail for HDAC10
Basic Information Top
| Gene Symbol: | HDAC10 ( DKFZp761B039,HD10,MGC149722 ) |
|---|---|
| Gene Full Name: | histone deacetylase 10 |
| Band: | 22q13.33 |
| Quick Links | Entrez ID:83933; OMIM: 608544; Uniprot ID:HDA10_HUMAN; ENSEMBL ID: ENSG00000100429; HGNC ID: 18128 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.26593
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 23 / 564012 | 40 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 88 / 1939121 | 45 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 2 / 263845 | 7 |  |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 10 / 95842 | 104 | |
| liver tumor | 21 / 96359 | 217 |  |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 12 / 71755 | 167 | |
| non-neoplasia | 8 / 97250 | 82 | |
| normal | 124 / 3360307 | 36 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 33 / 125680 | 262 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 17 / 123478 | 137 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 30 / 1100989 | 27 | |
| cervix | 8 / 48171 | 166 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 3 / 211054 | 14 | |
| heart | 1 / 89626 | 11 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 22 / 207743 | 105 | |
| lung | 8 / 336974 | 23 | |
| lymph | 6 / 44270 | 135 | |
| lymph node | 14 / 91610 | 152 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 10 / 280825 | 35 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 4 / 210574 | 18 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 6 / 96619 | 62 | |
| testis | 2 / 330442 | 6 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P368740
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.16 ± 0.65 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.16 ± 0.6 | |
| Basal Part of Pons | 4.23 ± 0.62 | |
| Cerebellar Cortex | 4.74 ± 0.52 | |
| Cerebellar Nuclei | 3.89 ± 0.53 | |
| Claustrum | 3.92 ± 0.82 | |
| Epithalamus | 3.9 ± 0.75 | |
| Frontal Lobe | 4.15 ± 0.65 | |
| Globus Pallidus | 3.28 ± 0.46 | |
| Hypothalamus | 4.2 ± 0.66 | |
| Insula | 4.38 ± 0.55 | |
| Limbic Lobe | 4.11 ± 0.64 | |
| Mesencephalon | 4.18 ± 0.66 | |
| Myelencephalon | 4.19 ± 0.67 | |
| Occipital Lobe | 4.46 ± 0.49 | |
| Parietal Lobe | 4.21 ± 0.51 | |
| Pontine Tegmentum | 4.1 ± 0.58 | |
| Striatum | 3.57 ± 0.63 | |
| Subthalamus | 3.86 ± 0.71 | |
| Temporal Lobe | 4.39 ± 0.52 | |
| Thalamus | 4.34 ± 0.63 | |
| White Matter | 2.64 ± 0.76 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Hdac10 | CB | Cerebellum | 0.84 | |
| 1.8 | | |||
| Hdac10 | CTX | Cerebral cortex | 0.24 | |
| 0.39 | | |||
| Hdac10 | HIP | Hippocampal region | 0.34 | |
| 0.7 | | |||
| Hdac10 | HPF | Hippocampal formation | 0.25 | |
| 0.53 | | |||
| Hdac10 | HY | Hypothalamus | 0.12 | |
| 0.14 | | |||
| Hdac10 | LSX | Lateral septal complex | 0 | |
| 0 | | |||
| Hdac10 | MB | Midbrain | 0.25 | |
| 0.37 | | |||
| Hdac10 | MY | Medulla | 0.36 | |
| 0.41 | | |||
| Hdac10 | OLF | Olfactory bulb | 0.21 | |
| 0.33 | | |||
| Hdac10 | P | Pons | 0.16 | |
| 0.26 | | |||
| Hdac10 | PAL | Pallidum | 0.11 | |
| 0.1 | | |||
| Hdac10 | RHP | Retrohippocampal region | 0.12 | |
| 0.27 | | |||
| Hdac10 | sAMY | Striatum-like amygdalar nuclei | 0.11 | |
| 0.11 | | |||
| Hdac10 | STR | Striatum | 0.09 | |
| 0.12 | | |||
| Hdac10 | STRd | Striatum dorsal region | 0.06 | |
| 0.1 | | |||
| Hdac10 | STRv | Striatum ventral region | 0.22 | |
| 0.21 | | |||
| Hdac10 | TH | Thalamus | 0.12 | |
| 0.16 | |