Annotation Detail for GPR98
Basic Information Top
| Gene Symbol: | GPR98 ( DKFZp761P0710,FEB4,KIAA0686,MASS1,USH2B,USH2C,VLGR1,VLGR1b ) |
|---|---|
| Gene Full Name: | G protein-coupled receptor 98 |
| Band: | 5q13 |
| Quick Links | Entrez ID:84059; OMIM: 602851; Uniprot ID:GPR98_HUMAN; ENSEMBL ID: ENSG00000164199; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591777
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 16 / 564012 | 28 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 |  |
| adult | 67 / 1939121 | 34 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 82 / 3360307 | 24 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 33 / 125191 | 263 |  |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 7 / 33197 | 210 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 50 / 1100989 | 45 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 32 / 149255 | 214 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_299_PI416408490
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.82 ± 0.57 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.21 ± 0.42 | |
| Basal Part of Pons | 4.7 ± 0.52 | |
| Cerebellar Cortex | 4.46 ± 0.54 | |
| Cerebellar Nuclei | 4.24 ± 0.43 | |
| Claustrum | 5.74 ± 0.64 | |
| Epithalamus | 5.39 ± 0.96 | |
| Frontal Lobe | 5.14 ± 0.75 | |
| Globus Pallidus | 3.24 ± 1.86 | |
| Hypothalamus | 5.11 ± 0.83 | |
| Insula | 5.72 ± 0.6 | |
| Limbic Lobe | 5.86 ± 0.63 | |
| Mesencephalon | 5.05 ± 0.83 | |
| Myelencephalon | 5.15 ± 0.82 | |
| Occipital Lobe | 5.09 ± 0.61 | |
| Parietal Lobe | 5 ± 0.95 | |
| Pontine Tegmentum | 5.15 ± 0.81 | |
| Striatum | 6.73 ± 0.47 | |
| Subthalamus | 4.62 ± 0.88 | |
| Temporal Lobe | 5.38 ± 0.74 | |
| Thalamus | 4.05 ± 0.78 | |
| White Matter | 3.63 ± 0.36 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gpr98 | CB | Cerebellum | 1.45 | |
| 1.98 | | |||
| Gpr98 | CTX | Cerebral cortex | 0.65 | |
| 0.67 | | |||
| Gpr98 | HIP | Hippocampal region | 1.91 | |
| 1.98 | | |||
| Gpr98 | HPF | Hippocampal formation | 1.26 | |
| 1.25 | | |||
| Gpr98 | HY | Hypothalamus | 1.08 | |
| 1.01 | | |||
| Gpr98 | LSX | Lateral septal complex | 1.57 | |
| 1.65 | | |||
| Gpr98 | MB | Midbrain | 1.24 | |
| 1.69 | | |||
| Gpr98 | MY | Medulla | 1.01 | |
| 1.2 | | |||
| Gpr98 | OLF | Olfactory bulb | 0.89 | |
| 0.93 | | |||
| Gpr98 | P | Pons | 0.84 | |
| 1.22 | | |||
| Gpr98 | PAL | Pallidum | 0.43 | |
| 0.38 | | |||
| Gpr98 | RHP | Retrohippocampal region | 0.35 | |
| 0.36 | | |||
| Gpr98 | sAMY | Striatum-like amygdalar nuclei | 0.28 | |
| 0.55 | | |||
| Gpr98 | STR | Striatum | 0.63 | |
| 0.66 | | |||
| Gpr98 | STRd | Striatum dorsal region | 0.44 | |
| 0.51 | | |||
| Gpr98 | STRv | Striatum ventral region | 1.05 | |
| 0.77 | | |||
| Gpr98 | TH | Thalamus | 0.75 | |
| 1.02 | |