AutismKB 2.0

Annotation Detail for UXT


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Basic Information Top
Gene Symbol:UXT ( ART-27,STAP1 )
Gene Full Name: ubiquitously-expressed transcript
Band: Xp11.23
Quick LinksEntrez ID:8409; OMIM: 300234; Uniprot ID:UXT_HUMAN; ENSEMBL ID: ENSG00000126756; HGNC ID: 12641
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst3 / 6231948
fetus18 / 56401231
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult52 / 193912126
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor8 / 9417884
cervical tumor2 / 3436658
chondrosarcoma1 / 8282312
colorectal tumor7 / 11424661
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor7 / 26384526
glioma8 / 10688374
head and neck tumor5 / 13630236
kidney tumor1 / 6895914
leukemia4 / 9584241
liver tumor2 / 9635920
lung tumor1 / 1031279
lymphoma4 / 7175555
non-neoplasia1 / 9725010
normal105 / 336030731
ovarian tumor2 / 7668226
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor11 / 12494988
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites2 / 4001549
bladder0 / 297570 
blood4 / 12347832
bone1 / 7165513
bone marrow3 / 4880161
brain22 / 110098919
cervix2 / 4817141
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue15 / 21572269
esophagus0 / 202090 
eye5 / 21105423
heart2 / 8962622
intestine11 / 23447246
kidney4 / 21177718
larynx0 / 241450 
liver11 / 20774352
lung12 / 33697435
lymph2 / 4427045
lymph node3 / 9161032
mammary gland8 / 15327152
mouth4 / 6705259
muscle3 / 10771527
nerve0 / 157680 
ovary3 / 10205129
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx4 / 4132896
pituitary gland0 / 165850 
placenta7 / 28082524
prostate4 / 18934521
salivary gland0 / 201550 
skin13 / 21057461
spleen0 / 539520 
stomach3 / 9661931
testis8 / 33044224
thymus3 / 8113136
thyroid1 / 4747321
tonsil1 / 1699958
trachea2 / 5241338
umbilical cord0 / 136800 
uterus8 / 23287834
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218495_at
Cell line Expression level Expression bar
721_B_lymphoblasts681.1
Adipocyte125.6
AdrenalCortex151.05
Adrenalgland169.15
Amygdala29.6
Appendix21.25
AtrioventricularNode21.1
BDCA4+_DentriticCells767.8
Bonemarrow118.3
BronchialEpithelialCells391.8
CD105+_Endothelial548.65
CD14+_Monocytes703.3
CD19+_BCells(neg._sel.)1371.3
CD33+_Myeloid506.05
CD34+1106.65
CD4+_Tcells929.7
CD56+_NKCells491.95
CD71+_EarlyErythroid417.25
CD8+_Tcells854.25
CardiacMyocytes90.05
Caudatenucleus56.9
Cerebellum26.95
CerebellumPeduncles39.8
CiliaryGanglion20.2
CingulateCortex28.6
Colorectaladenocarcinoma373.55
DorsalRootGanglion14.35
FetalThyroid91.85
Fetalbrain54.9
Fetalliver84.35
Fetallung150.2
GlobusPallidus8.3
Heart322.15
Hypothalamus49.25
Kidney72.55
Leukemia_chronicMyelogenousK-562202.85
Leukemia_promyelocytic-HL-60277.85
Leukemialymphoblastic(MOLT-4)356.1
Liver316.5
Lung326.2
Lymphnode239.3
Lymphoma_burkitts(Daudi)616.05
Lymphoma_burkitts(Raji)157.5
MedullaOblongata27.65
OccipitalLobe22.65
OlfactoryBulb59.55
Ovary84.35
Pancreas130.8
PancreaticIslet326.6
ParietalLobe17.2
Pituitary135.4
Placenta300.6
Pons18.75
PrefrontalCortex56.25
Prostate236.45
Salivarygland162.05
SkeletalMuscle11.55
Skin23.75
SmoothMuscle188.35
Spinalcord60.85
SubthalamicNucleus32
SuperiorCervicalGanglion11.7
TemporalLobe11.25
Testis99.6
TestisGermCell54.6
TestisIntersitial20.5
TestisLeydigCell19.55
TestisSeminiferousTubule23.75
Thalamus37.65
Thymus622.8
Thyroid131.15
Tongue69.35
Tonsil194.1
Trachea77.25
TrigeminalGanglion12.05
Uterus40.9
UterusCorpus71.1
WholeBlood385.95
Wholebrain81
colon91.45
pineal_day172.88
pineal_night141.86
retina78.175
small_intestine103.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_4762_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.24 ± 0.45
Basal Forebrain7.61 ± 0.25
Basal Part of Pons8 ± 0.28
Cerebellar Cortex7.61 ± 0.35
Cerebellar Nuclei7.79 ± 0.38
Claustrum6.92 ± 0.6
Epithalamus7.81 ± 0.22
Frontal Lobe7.63 ± 0.36
Globus Pallidus8.17 ± 0.37
Hypothalamus7.77 ± 0.27
Insula7.49 ± 0.35
Limbic Lobe7.22 ± 0.51
Mesencephalon7.4 ± 0.48
Myelencephalon7.46 ± 0.48
Occipital Lobe6.95 ± 0.44
Parietal Lobe7.42 ± 0.42
Pontine Tegmentum7.47 ± 0.33
Striatum7.39 ± 0.36
Subthalamus7.77 ± 0.18
Temporal Lobe7.54 ± 0.42
Thalamus7.44 ± 0.47
White Matter8.5 ± 0.57
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
UxtCBCerebellum0.45
0.92
UxtCTXCerebral cortex0.59
0.55
UxtHIPHippocampal region0.4
0.43
UxtHPFHippocampal formation0.31
0.33
UxtHYHypothalamus0.22
0.22
UxtLSXLateral septal complex0.21
0.26
UxtMBMidbrain0.24
0.25
UxtMYMedulla0.18
0.3
UxtOLFOlfactory bulb0.54
1.75
UxtPPons0.13
0.41
UxtPALPallidum0.05
0.2
UxtRHPRetrohippocampal region0.19
0.23
UxtsAMYStriatum-like amygdalar nuclei0.24
0.36
UxtSTRStriatum0.24
0.23
UxtSTRdStriatum dorsal region0.24
0.23
UxtSTRvStriatum ventral region0.19
0.11
UxtTHThalamus0.17
0.22
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
UXT_HUMAN_133 11 133 143 AHIHMLLEGLR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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