AutismKB 2.0

Annotation Detail for ANTXR1


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Basic Information Top
Gene Symbol:ANTXR1 ( ATR,FLJ10601,FLJ11298,FLJ21776,TEM8 )
Gene Full Name: anthrax toxin receptor 1
Band: 2p13.3
Quick LinksEntrez ID:84168; OMIM: 606410; Uniprot ID:ANTR1_HUMAN; ENSEMBL ID: ENSG00000169604; HGNC ID: 21014
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst2 / 6231932
fetus78 / 564012138
neonate3 / 3109796
infant82 / 236203471
juvenile9 / 55556161
adult220 / 1939121113
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor5 / 12794390
bladder carcinoma1 / 1747557
breast (mammary gland) tumor2 / 9417821
cervical tumor7 / 34366203
chondrosarcoma24 / 82823289
colorectal tumor7 / 11424661
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor30 / 263845113
glioma10 / 10688393
head and neck tumor11 / 13630280
kidney tumor6 / 6895987
leukemia5 / 9584252
liver tumor5 / 9635951
lung tumor10 / 10312796
lymphoma1 / 7175513
non-neoplasia12 / 97250123
normal337 / 3360307100
ovarian tumor5 / 7668265
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS101 / 125680803
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor5 / 12494940
soft tissue/muscle tissue tumor7 / 12519155
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue4 / 13106305
adrenal gland7 / 33197210
ascites1 / 4001524
bladder2 / 2975767
blood5 / 12347840
bone10 / 71655139
bone marrow4 / 4880181
brain159 / 1100989144
cervix9 / 48171186
connective tissue27 / 149255180
ear16 / 16212986
embryonic tissue16 / 21572274
esophagus0 / 202090 
eye19 / 21105490
heart9 / 89626100
intestine20 / 23447285
kidney10 / 21177747
larynx3 / 24145124
liver7 / 20774333
lung41 / 336974121
lymph0 / 442700 
lymph node0 / 916100 
mammary gland19 / 153271123
mouth10 / 67052149
muscle5 / 10771546
nerve1 / 1576863
ovary5 / 10205148
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland2 / 16585120
placenta24 / 28082585
prostate25 / 189345132
salivary gland0 / 201550 
skin32 / 210574151
spleen2 / 5395237
stomach4 / 9661941
testis15 / 33044245
thymus5 / 8113161
thyroid3 / 4747363
tonsil0 / 169990 
trachea5 / 5241395
umbilical cord2 / 13680146
uterus34 / 232878145
vascular16 / 51780308
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220092_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.05
Adipocyte8.7
AdrenalCortex13.4
Adrenalgland8.2
Amygdala8.55
Appendix11.6
AtrioventricularNode12.9
BDCA4+_DentriticCells7.95
Bonemarrow9.95
BronchialEpithelialCells8.05
CD105+_Endothelial8.55
CD14+_Monocytes9.25
CD19+_BCells(neg._sel.)9.15
CD33+_Myeloid10.15
CD34+10.15
CD4+_Tcells8.25
CD56+_NKCells9.15
CD71+_EarlyErythroid8.7
CD8+_Tcells7.25
CardiacMyocytes18.85
Caudatenucleus8
Cerebellum7.1
CerebellumPeduncles11.45
CiliaryGanglion10.4
CingulateCortex9.7
Colorectaladenocarcinoma8.55
DorsalRootGanglion8.9
FetalThyroid9.4
Fetalbrain8.45
Fetalliver8.1
Fetallung7.3
GlobusPallidus7.4
Heart16.75
Hypothalamus8.85
Kidney8.35
Leukemia_chronicMyelogenousK-5627.8
Leukemia_promyelocytic-HL-607.55
Leukemialymphoblastic(MOLT-4)6.6
Liver13.75
Lung9.6
Lymphnode7.25
Lymphoma_burkitts(Daudi)11.8
Lymphoma_burkitts(Raji)14.2
MedullaOblongata7.65
OccipitalLobe7.75
OlfactoryBulb6.55
Ovary8.8
Pancreas7.55
PancreaticIslet9.35
ParietalLobe10.4
Pituitary10.15
Placenta10.2
Pons8.9
PrefrontalCortex9.5
Prostate10.1
Salivarygland7.45
SkeletalMuscle18.4
Skin17.6
SmoothMuscle18.45
Spinalcord9.25
SubthalamicNucleus9.05
SuperiorCervicalGanglion18.95
TemporalLobe8.65
Testis7.35
TestisGermCell7
TestisIntersitial8.15
TestisLeydigCell9.8
TestisSeminiferousTubule7.5
Thalamus9.3
Thymus6.4
Thyroid10.75
Tongue12.2
Tonsil8.65
Trachea7
TrigeminalGanglion14
Uterus7.1
UterusCorpus15.25
WholeBlood9.05
Wholebrain6.65
colon8.65
pineal_day10.36
pineal_night10.36
retina11.025
small_intestine8.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P84576
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.22 ± 0.47
Basal Forebrain4.34 ± 0.5
Basal Part of Pons3.85 ± 0.58
Cerebellar Cortex4.28 ± 0.54
Cerebellar Nuclei3.91 ± 0.62
Claustrum4.1 ± 0.65
Epithalamus6.19 ± 0.57
Frontal Lobe4.2 ± 0.61
Globus Pallidus5.83 ± 0.48
Hypothalamus4.47 ± 1.12
Insula4.22 ± 0.54
Limbic Lobe4.25 ± 0.55
Mesencephalon4.68 ± 0.58
Myelencephalon4.54 ± 0.74
Occipital Lobe4.94 ± 0.63
Parietal Lobe4.42 ± 0.55
Pontine Tegmentum4.42 ± 0.76
Striatum5.1 ± 0.86
Subthalamus4.3 ± 0.26
Temporal Lobe4.31 ± 0.7
Thalamus4.72 ± 0.6
White Matter5.03 ± 0.54
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Antxr1CBCerebellum1.49
1.78
Antxr1CTXCerebral cortex1.93
1.85
Antxr1HIPHippocampal region1.75
1.45
Antxr1HPFHippocampal formation1.63
1.57
Antxr1HYHypothalamus0.1
0.11
Antxr1LSXLateral septal complex0.04
0
Antxr1MBMidbrain0.92
1.14
Antxr1MYMedulla1.55
1.73
Antxr1OLFOlfactory bulb2.6
2.74
Antxr1PPons1.12
1.55
Antxr1PALPallidum0.23
0.38
Antxr1RHPRetrohippocampal region1.51
1.85
Antxr1sAMYStriatum-like amygdalar nuclei0.23
0.21
Antxr1STRStriatum0.7
0.59
Antxr1STRdStriatum dorsal region1
0.86
Antxr1STRvStriatum ventral region0.13
0.11
Antxr1THThalamus0.53
0.55
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
ANTR1_HUMAN_80 9 80 88 MSFIVFSTR PRIDE
PAp00039863 22 196 217 DHVFPVNDGFQALQGIIHSILK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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