Annotation Detail for ELMOD3
Basic Information Top
| Gene Symbol: | ELMOD3 ( FLJ21977,FLJ35601,LST3,MGC111036,RBED1,RBM29 ) |
|---|---|
| Gene Full Name: | ELMO/CED-12 domain containing 3 |
| Band: | 2p11.2 |
| Quick Links | Entrez ID:84173; OMIM: NA; Uniprot ID:ELMD3_HUMAN; ENSEMBL ID: ENSG00000115459; HGNC ID: 26158 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.269990
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 29 / 564012 | 51 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 65 / 1939121 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 2 / 17290 | 115 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 15 / 263845 | 56 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 15 / 95842 | 156 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 10 / 103127 | 96 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 134 / 3360307 | 39 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 8 / 102680 | 77 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 4 / 13106 | 305 |  |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 5 / 123478 | 40 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 36 / 1100989 | 32 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 7 / 211054 | 33 | |
| heart | 7 / 89626 | 78 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 6 / 207743 | 28 | |
| lung | 17 / 336974 | 50 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 11 / 107715 | 102 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 13 / 189345 | 68 | |
| salivary gland | 4 / 20155 | 198 | |
| skin | 5 / 210574 | 23 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 5 / 96619 | 51 | |
| testis | 12 / 330442 | 36 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 7 / 232878 | 30 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_23_P154256
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.12 ± 0.39 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.37 ± 0.21 | |
| Basal Part of Pons | 7.57 ± 0.24 | |
| Cerebellar Cortex | 7.73 ± 0.17 | |
| Cerebellar Nuclei | 7.73 ± 0.21 | |
| Claustrum | 6.99 ± 0.41 | |
| Epithalamus | 7.6 ± 0.36 | |
| Frontal Lobe | 7.43 ± 0.34 | |
| Globus Pallidus | 7.66 ± 0.21 | |
| Hypothalamus | 7.29 ± 0.24 | |
| Insula | 7.43 ± 0.21 | |
| Limbic Lobe | 7.36 ± 0.31 | |
| Mesencephalon | 7.49 ± 0.38 | |
| Myelencephalon | 7.46 ± 0.35 | |
| Occipital Lobe | 7.73 ± 0.3 | |
| Parietal Lobe | 7.45 ± 0.29 | |
| Pontine Tegmentum | 7.4 ± 0.33 | |
| Striatum | 7.42 ± 0.31 | |
| Subthalamus | 7.59 ± 0.13 | |
| Temporal Lobe | 7.45 ± 0.24 | |
| Thalamus | 7.53 ± 0.25 | |
| White Matter | 8.48 ± 0.13 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Rbed1 | CB | Cerebellum | 8.68 | |
| 7.5 | | |||
| Rbed1 | CTX | Cerebral cortex | 4.28 | |
| 1.5 | | |||
| Rbed1 | HIP | Hippocampal region | 5.96 | |
| 4.02 | | |||
| Rbed1 | HPF | Hippocampal formation | 4.44 | |
| 2.4 | | |||
| Rbed1 | HY | Hypothalamus | 2.5 | |
| 0.92 | | |||
| Rbed1 | LSX | Lateral septal complex | 3.43 | |
| 1.46 | | |||
| Rbed1 | MB | Midbrain | 2.58 | |
| 1.21 | | |||
| Rbed1 | MY | Medulla | 2.39 | |
| 1.45 | | |||
| Rbed1 | OLF | Olfactory bulb | 8.87 | |
| 5.1 | | |||
| Rbed1 | P | Pons | 4.73 | |
| 2.24 | | |||
| Rbed1 | PAL | Pallidum | 0.97 | |
| 0.42 | | |||
| Rbed1 | RHP | Retrohippocampal region | 2.79 | |
| 0.84 | | |||
| Rbed1 | sAMY | Striatum-like amygdalar nuclei | 0.49 | |
| 0.15 | | |||
| Rbed1 | STR | Striatum | 0.92 | |
| 0.37 | | |||
| Rbed1 | STRd | Striatum dorsal region | 0.61 | |
| 0.27 | | |||
| Rbed1 | STRv | Striatum ventral region | 0.97 | |
| 0.28 | | |||
| Rbed1 | TH | Thalamus | 7.34 | |
| 2.46 | |