AutismKB 2.0

Annotation Detail for MFSD7


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Basic Information Top
Gene Symbol:MFSD7 ( FLJ22269 )
Gene Full Name: major facilitator superfamily domain containing 7
Band: 4p16.3
Quick LinksEntrez ID:84179; OMIM: NA; Uniprot ID:MFSD7_HUMAN; ENSEMBL ID: ENSG00000169026; HGNC ID: 26177
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus3 / 5640125
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult27 / 193912113
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal33 / 33603079
ovarian tumor5 / 7668265
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone1 / 7165513
bone marrow0 / 488010 
brain5 / 11009894
cervix2 / 4817141
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney1 / 2117774
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary6 / 10205158
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta6 / 28082521
prostate0 / 1893450 
salivary gland0 / 201550 
skin3 / 21057414
spleen2 / 5395237
stomach0 / 966190 
testis13 / 33044239
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214269_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.55
Adipocyte4.6
AdrenalCortex5.2
Adrenalgland4.05
Amygdala4.8
Appendix4.95
AtrioventricularNode3.9
BDCA4+_DentriticCells4.85
Bonemarrow4.8
BronchialEpithelialCells4.55
CD105+_Endothelial4.65
CD14+_Monocytes5.35
CD19+_BCells(neg._sel.)4.85
CD33+_Myeloid6.3
CD34+5.75
CD4+_Tcells4.95
CD56+_NKCells5.45
CD71+_EarlyErythroid4.45
CD8+_Tcells4.4
CardiacMyocytes6.4
Caudatenucleus4.2
Cerebellum3.8
CerebellumPeduncles5.45
CiliaryGanglion3.6
CingulateCortex4.85
Colorectaladenocarcinoma4.7
DorsalRootGanglion3.8
FetalThyroid4.6
Fetalbrain4.55
Fetalliver4.1
Fetallung3.75
GlobusPallidus3.55
Heart6.3
Hypothalamus5
Kidney4
Leukemia_chronicMyelogenousK-5624.25
Leukemia_promyelocytic-HL-604.15
Leukemialymphoblastic(MOLT-4)3.7
Liver6.4
Lung5.2
Lymphnode3.95
Lymphoma_burkitts(Daudi)6.1
Lymphoma_burkitts(Raji)6.8
MedullaOblongata4.2
OccipitalLobe4.2
OlfactoryBulb3.7
Ovary3.25
Pancreas3.85
PancreaticIslet5
ParietalLobe5.05
Pituitary5.5
Placenta4.7
Pons4.55
PrefrontalCortex5.75
Prostate5.4
Salivarygland3.8
SkeletalMuscle5.85
Skin3.9
SmoothMuscle5.25
Spinalcord5.05
SubthalamicNucleus4.4
SuperiorCervicalGanglion5.7
TemporalLobe4.35
Testis4.05
TestisGermCell3.95
TestisIntersitial3.95
TestisLeydigCell4.9
TestisSeminiferousTubule4
Thalamus4.8
Thymus3.65
Thyroid5.75
Tongue4.85
Tonsil4.55
Trachea3.95
TrigeminalGanglion5
Uterus3.75
UterusCorpus4.35
WholeBlood5.05
Wholebrain3.85
colon4.7
pineal_day5.78
pineal_night5.66
retina5.65
small_intestine4.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_660_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.29 ± 0.78
Basal Forebrain3.08 ± 0.23
Basal Part of Pons3.41 ± 0.71
Cerebellar Cortex3.25 ± 0.6
Cerebellar Nuclei3.1 ± 0.64
Claustrum3.27 ± 0.72
Epithalamus3.16 ± 0.64
Frontal Lobe3.09 ± 0.72
Globus Pallidus2.98 ± 0.89
Hypothalamus3.09 ± 0.61
Insula3.2 ± 0.54
Limbic Lobe2.89 ± 0.77
Mesencephalon3.08 ± 0.65
Myelencephalon3.02 ± 0.72
Occipital Lobe2.91 ± 0.66
Parietal Lobe3.08 ± 0.67
Pontine Tegmentum2.96 ± 0.66
Striatum2.89 ± 0.63
Subthalamus3.71 ± 2.23
Temporal Lobe2.93 ± 0.72
Thalamus2.86 ± 0.64
White Matter3.04 ± 1.01
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Mfsd7CBCerebellum3.77
6.74
Mfsd7CTXCerebral cortex0.8
0.84
Mfsd7HIPHippocampal region2.7
3.97
Mfsd7HPFHippocampal formation1.74
2.31
Mfsd7HYHypothalamus0.22
0.37
Mfsd7LSXLateral septal complex0.81
1.06
Mfsd7MBMidbrain2.85
4.01
Mfsd7MYMedulla1.6
1.89
Mfsd7OLFOlfactory bulb1.25
1.72
Mfsd7PPons0.87
1.35
Mfsd7PALPallidum0.15
0.15
Mfsd7RHPRetrohippocampal region0.38
0.35
Mfsd7sAMYStriatum-like amygdalar nuclei0.26
0.12
Mfsd7STRStriatum0.5
0.68
Mfsd7STRdStriatum dorsal region0.56
0.86
Mfsd7STRvStriatum ventral region0.19
0.22
Mfsd7THThalamus0.49
0.49
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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