Annotation Detail for WDR24
Basic Information Top
| Gene Symbol: | WDR24 ( C16orf21,DKFZp434F054,JFP7 ) |
|---|---|
| Gene Full Name: | WD repeat domain 24 |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:84219; OMIM: NA; Uniprot ID:WDR24_HUMAN; ENSEMBL ID: ENSG00000127580; HGNC ID: 20852 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.459632
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 4 / 62319 | 64 |  |
| fetus | 16 / 564012 | 28 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 61 / 1939121 | 31 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 101 / 3360307 | 30 | |
| ovarian tumor | 7 / 76682 | 91 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 8 / 125191 | 63 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 |  |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 29 / 1100989 | 26 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 12 / 211054 | 56 | |
| heart | 1 / 89626 | 11 | |
| intestine | 12 / 234472 | 51 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 7 / 336974 | 20 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 10 / 102051 | 97 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 6 / 96619 | 62 | |
| testis | 8 / 330442 | 24 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_7159_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.76 ± 1.04 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.26 ± 0.35 | |
| Basal Part of Pons | 2.22 ± 0.49 | |
| Cerebellar Cortex | 2.43 ± 0.81 | |
| Cerebellar Nuclei | 2.6 ± 0.63 | |
| Claustrum | 3.1 ± 0.75 | |
| Epithalamus | 2.29 ± 0.67 | |
| Frontal Lobe | 2.5 ± 0.7 | |
| Globus Pallidus | 2.2 ± 0.69 | |
| Hypothalamus | 2.4 ± 0.61 | |
| Insula | 2.32 ± 0.59 | |
| Limbic Lobe | 2.36 ± 0.71 | |
| Mesencephalon | 2.54 ± 0.74 | |
| Myelencephalon | 2.48 ± 0.67 | |
| Occipital Lobe | 2.34 ± 0.76 | |
| Parietal Lobe | 2.53 ± 0.78 | |
| Pontine Tegmentum | 2.46 ± 0.75 | |
| Striatum | 2.1 ± 0.62 | |
| Subthalamus | 2.49 ± 0.84 | |
| Temporal Lobe | 2.52 ± 0.76 | |
| Thalamus | 2.43 ± 0.63 | |
| White Matter | 2.24 ± 0.81 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Wdr24 | CB | Cerebellum | 7.05 | |
| 7.89 | | |||
| Wdr24 | CTX | Cerebral cortex | 16.56 | |
| 12.34 | | |||
| Wdr24 | HIP | Hippocampal region | 10.02 | |
| 9.51 | | |||
| Wdr24 | HPF | Hippocampal formation | 8.2 | |
| 7.14 | | |||
| Wdr24 | HY | Hypothalamus | 0.9 | |
| 1.01 | | |||
| Wdr24 | LSX | Lateral septal complex | 3.99 | |
| 5.27 | | |||
| Wdr24 | MB | Midbrain | 3.4 | |
| 4.1 | | |||
| Wdr24 | MY | Medulla | 4.65 | |
| 6.35 | | |||
| Wdr24 | OLF | Olfactory bulb | 7.73 | |
| 5.72 | | |||
| Wdr24 | P | Pons | 3.24 | |
| 4.95 | | |||
| Wdr24 | PAL | Pallidum | 0.77 | |
| 0.86 | | |||
| Wdr24 | RHP | Retrohippocampal region | 4.62 | |
| 3.38 | | |||
| Wdr24 | sAMY | Striatum-like amygdalar nuclei | 1.25 | |
| 1.02 | | |||
| Wdr24 | STR | Striatum | 0.83 | |
| 0.7 | | |||
| Wdr24 | STRd | Striatum dorsal region | 0.44 | |
| 0.33 | | |||
| Wdr24 | STRv | Striatum ventral region | 1.45 | |
| 1.02 | | |||
| Wdr24 | TH | Thalamus | 3.63 | |
| 3.01 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00028164 | 17 | 20 | 36 | TMHCHLDAPANAISVCR | Peptide Atlas |