Annotation Detail for FLYWCH1
Basic Information Top
| Gene Symbol: | FLYWCH1 ( - ) |
|---|---|
| Gene Full Name: | FLYWCH-type zinc finger 1 |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:84256; OMIM: NA; Uniprot ID:FWCH1_HUMAN; ENSEMBL ID: ENSG00000059122; HGNC ID: 25404 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.655321
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 11 / 564012 | 19 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 91 / 1939121 | 46 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 12 / 82823 | 144 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 12 / 119369 | 100 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 15 / 106883 | 140 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 7 / 103127 | 67 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 111 / 3360307 | 33 | |
| ovarian tumor | 9 / 76682 | 117 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 1 / 102680 | 9 |  |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 7 / 125191 | 55 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 6 / 71655 | 83 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 34 / 1100989 | 30 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 27 / 211054 | 127 | |
| heart | 3 / 89626 | 33 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 0 / 24145 | 0 | |
| liver | 7 / 207743 | 33 | |
| lung | 17 / 336974 | 50 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 10 / 102051 | 97 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 3 / 16585 | 180 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 5 / 210574 | 23 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 12 / 96619 | 124 | |
| testis | 4 / 330442 | 12 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 11 / 232878 | 47 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: A_23_P89018
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.91 ± 0.48 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.15 ± 0.37 | |
| Basal Part of Pons | 5.43 ± 0.36 | |
| Cerebellar Cortex | 5.43 ± 0.46 | |
| Cerebellar Nuclei | 4.96 ± 0.46 | |
| Claustrum | 4.91 ± 0.42 | |
| Epithalamus | 4.87 ± 0.53 | |
| Frontal Lobe | 5.27 ± 0.46 | |
| Globus Pallidus | 4.88 ± 0.29 | |
| Hypothalamus | 5.05 ± 0.54 | |
| Insula | 5.21 ± 0.37 | |
| Limbic Lobe | 5.02 ± 0.54 | |
| Mesencephalon | 5.2 ± 0.42 | |
| Myelencephalon | 5.17 ± 0.48 | |
| Occipital Lobe | 4.94 ± 0.44 | |
| Parietal Lobe | 5.21 ± 0.47 | |
| Pontine Tegmentum | 5.03 ± 0.46 | |
| Striatum | 4.63 ± 0.34 | |
| Subthalamus | 4.97 ± 0.44 | |
| Temporal Lobe | 5.25 ± 0.4 | |
| Thalamus | 5.31 ± 0.37 | |
| White Matter | 4.93 ± 0.53 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Flywch1 | CB | Cerebellum | 100 | |
| 100 | | |||
| Flywch1 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Flywch1 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Flywch1 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Flywch1 | HY | Hypothalamus | 100 | |
| 100 | | |||
| Flywch1 | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Flywch1 | MB | Midbrain | 100 | |
| 100 | | |||
| Flywch1 | MY | Medulla | 100 | |
| 100 | | |||
| Flywch1 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Flywch1 | P | Pons | 100 | |
| 100 | | |||
| Flywch1 | PAL | Pallidum | 100 | |
| 100 | | |||
| Flywch1 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Flywch1 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Flywch1 | STR | Striatum | 100 | |
| 100 | | |||
| Flywch1 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Flywch1 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Flywch1 | TH | Thalamus | 100 | |
| 100 | |