Annotation Detail for FBXW9
Basic Information Top
| Gene Symbol: | FBXW9 ( Fbw9,MGC10870 ) |
|---|---|
| Gene Full Name: | F-box and WD repeat domain containing 9 |
| Band: | 19p13.13 |
| Quick Links | Entrez ID:84261; OMIM: 609074; Uniprot ID:FBXW9_HUMAN; ENSEMBL ID: ENSG00000132004; HGNC ID: 28136 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.515154
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 9 / 564012 | 15 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 55 / 1939121 | 28 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 2 / 34366 | 58 |  |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 7 / 119369 | 58 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 11 / 136302 | 80 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 5 / 71755 | 69 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 66 / 3360307 | 19 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 7 / 125680 | 55 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 6 / 40015 | 149 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 24 / 1100989 | 21 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 0 / 89626 | 0 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 9 / 336974 | 26 | |
| lymph | 4 / 44270 | 90 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 8 / 280825 | 28 | |
| prostate | 11 / 189345 | 58 | |
| salivary gland | 10 / 20155 | 496 |  |
| skin | 4 / 210574 | 18 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 7 / 330442 | 21 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_5407_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.92 ± 0.76 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.3 ± 0.42 | |
| Basal Part of Pons | 3.98 ± 0.79 | |
| Cerebellar Cortex | 3.85 ± 0.66 | |
| Cerebellar Nuclei | 3.58 ± 0.84 | |
| Claustrum | 3.32 ± 0.71 | |
| Epithalamus | 4.75 ± 1.1 | |
| Frontal Lobe | 4.09 ± 0.56 | |
| Globus Pallidus | 3.03 ± 0.65 | |
| Hypothalamus | 3.82 ± 0.68 | |
| Insula | 4.23 ± 0.43 | |
| Limbic Lobe | 3.75 ± 0.69 | |
| Mesencephalon | 3.83 ± 0.69 | |
| Myelencephalon | 3.79 ± 0.72 | |
| Occipital Lobe | 3.09 ± 0.78 | |
| Parietal Lobe | 3.76 ± 0.58 | |
| Pontine Tegmentum | 3.75 ± 0.67 | |
| Striatum | 3.05 ± 0.83 | |
| Subthalamus | 4.25 ± 0.49 | |
| Temporal Lobe | 4.14 ± 0.54 | |
| Thalamus | 3.71 ± 0.57 | |
| White Matter | 2.65 ± 0.52 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Fbxw9 | CB | Cerebellum | 3.63 | |
| 3.67 | | |||
| Fbxw9 | CTX | Cerebral cortex | 8.68 | |
| 5.76 | | |||
| Fbxw9 | HIP | Hippocampal region | 2.42 | |
| 2.06 | | |||
| Fbxw9 | HPF | Hippocampal formation | 2.21 | |
| 2.03 | | |||
| Fbxw9 | HY | Hypothalamus | 0.4 | |
| 0.32 | | |||
| Fbxw9 | LSX | Lateral septal complex | 1.42 | |
| 1.04 | | |||
| Fbxw9 | MB | Midbrain | 0.8 | |
| 0.81 | | |||
| Fbxw9 | MY | Medulla | 4.15 | |
| 3.87 | | |||
| Fbxw9 | OLF | Olfactory bulb | 13.32 | |
| 9.18 | | |||
| Fbxw9 | P | Pons | 2.22 | |
| 2.17 | | |||
| Fbxw9 | PAL | Pallidum | 2.47 | |
| 1.99 | | |||
| Fbxw9 | RHP | Retrohippocampal region | 1.9 | |
| 1.94 | | |||
| Fbxw9 | sAMY | Striatum-like amygdalar nuclei | 2.99 | |
| 2.28 | | |||
| Fbxw9 | STR | Striatum | 2.7 | |
| 1.89 | | |||
| Fbxw9 | STRd | Striatum dorsal region | 2.39 | |
| 1.75 | | |||
| Fbxw9 | STRv | Striatum ventral region | 4.2 | |
| 2.58 | | |||
| Fbxw9 | TH | Thalamus | 1.8 | |
| 1.42 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| FBXW9_HUMAN_98 | 8 | 98 | 105 | LVLHVLSR | PRIDE |